AtGenExpress Visualization Tool (AVT)


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enter desired AGI or Affymetrix identifiers (comma
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254595_at; then press "Run"

AtGenExpress
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Schmid, M., Davison, T.S., Henz, S.R., Pape, U.J., Demar, M., Vingron, M.,
Schölkopf, B., Weigel, D. and Lohmann, J.U. (2005). A gene expression
map of Arabidopsis thaliana development. Nat. Genet. 37, 501-6.

back to AtGenExpress main page Explanation to samples and expression values

developer: Christian K. Widmer

get table as tab-delimited text file


tissue cluster tissue genotype age sample Id stress time treatment expression value for 261579_at (at1g01050)
root roots Wt 7 days ATGE_3 not applicable not applicable not applicable 1654.2341
root roots Wt 17 days ATGE_9 not applicable not applicable not applicable 1762.5698
root root Wt 15 days ATGE_93 not applicable not applicable not applicable 1382.9964
root root Wt 8 days ATGE_94 not applicable not applicable not applicable 1113.8837
root root Wt 8 days ATGE_95 not applicable not applicable not applicable 1157.0872
root root Wt 21 days ATGE_98 not applicable not applicable not applicable 1074.2510
root root Wt 21 days ATGE_99 not applicable not applicable not applicable 1086.3046
stem hypocotyl Wt 7 days ATGE_2 not applicable not applicable not applicable 1628.1486
stem 1st node Wt 21+ days ATGE_28 not applicable not applicable not applicable 1695.1081
stem stem, 2nd internode Wt 21+ days ATGE_27 not applicable not applicable not applicable 1577.3815
leaf cotyledons Wt 7 days ATGE_1 not applicable not applicable not applicable 1294.6738
leaf leaves 1 + 2 Wt 7 days ATGE_5 not applicable not applicable not applicable 1159.5429
leaf rosette leaf #4, 1 cm long Wt 10 days ATGE_10 not applicable not applicable not applicable 950.6797
leaf rosette leaf #4, 1 cm long gl1-T 10 days ATGE_11 not applicable not applicable not applicable 1118.1377
leaf rosette leaf # 2 Wt 17 days ATGE_12 not applicable not applicable not applicable 1154.8357
leaf rosette leaf # 4 Wt 17 days ATGE_13 not applicable not applicable not applicable 1293.7696
leaf rosette leaf # 6 Wt 17 days ATGE_14 not applicable not applicable not applicable 1373.1123
leaf rosette leaf # 8 Wt 17 days ATGE_15 not applicable not applicable not applicable 1371.7945
leaf rosette leaf # 10 Wt 17 days ATGE_16 not applicable not applicable not applicable 1410.3211
leaf rosette leaf # 12 Wt 17 days ATGE_17 not applicable not applicable not applicable 1276.3576
leaf rosette leaf # 12 gl1-T 17 days ATGE_18 not applicable not applicable not applicable 1215.5099
leaf leaf 7, petiole Wt 17 days ATGE_19 not applicable not applicable not applicable 1477.0441
leaf leaf 7, proximal half Wt 17 days ATGE_20 not applicable not applicable not applicable 1263.6651
leaf leaf 7, distal half Wt 17 days ATGE_21 not applicable not applicable not applicable 1111.0462
leaf leaf Wt 15 days ATGE_91 not applicable not applicable not applicable 783.8556
leaf senescing leaves Wt 35 days ATGE_25 not applicable not applicable not applicable 744.0562
leaf cauline leaves Wt 21+ days ATGE_26 not applicable not applicable not applicable 1299.9886
whole plant seedling, green parts Wt 7 days ATGE_7 not applicable not applicable not applicable 1000.5536
whole plant seedling, green parts Wt 8 days ATGE_96 not applicable not applicable not applicable 831.7224
whole plant seedling, green parts Wt 8 days ATGE_97 not applicable not applicable not applicable 927.2155
whole plant seedling, green parts Wt 21 days ATGE_100 not applicable not applicable not applicable 815.5033
whole plant seedling, green parts Wt 21 days ATGE_101 not applicable not applicable not applicable 770.4037
whole plant developmental drift, entire rosette after transition to flowering, but before bolting Wt 21 days ATGE_22 not applicable not applicable not applicable 1252.2322
whole plant as above Wt 22 days ATGE_23 not applicable not applicable not applicable 1248.4928
whole plant as above Wt 23 days ATGE_24 not applicable not applicable not applicable 1090.5217
whole plant vegetative rosette Wt 7 days ATGE_87 not applicable not applicable not applicable 912.7598
whole plant vegetative rosette Wt 14 days ATGE_89 not applicable not applicable not applicable 741.4991
whole plant vegetative rosette Wt 21 days ATGE_90 not applicable not applicable not applicable 727.8615
apex shoot apex, vegetative + young leaves Wt 7 days ATGE_4 not applicable not applicable not applicable 980.2067
apex shoot apex, vegetative Wt 7 days ATGE_6 not applicable not applicable not applicable 1115.3269
apex shoot apex, transition (before bolting) Wt 14 days ATGE_8 not applicable not applicable not applicable 1042.9718
apex shoot apex, inflorescence (after bolting) Wt 21 days ATGE_29 not applicable not applicable not applicable 870.3420
apex shoot apex, inflorescence (after bolting) clv3-7 21+ days ATGE_46 not applicable not applicable not applicable 1088.7686
apex shoot apex, inflorescence (after bolting) lfy-12 21+ days ATGE_47 not applicable not applicable not applicable 907.5307
apex shoot apex, inflorescence (after bolting) ap1-15 21+ days ATGE_48 not applicable not applicable not applicable 933.6380
apex shoot apex, inflorescence (after bolting) ap2-6 21+ days ATGE_49 not applicable not applicable not applicable 1011.0212
apex shoot apex, inflorescence (after bolting) ufo-1 21+ days ATGE_52 not applicable not applicable not applicable 1038.8660
apex shoot apex, inflorescence (after bolting) ap3-6 21+ days ATGE_50 not applicable not applicable not applicable 1060.6788
apex shoot apex, inflorescence (after bolting) ag-12 21+ days ATGE_51 not applicable not applicable not applicable 948.5734
flowers flowers stage 9 Wt 21+ days ATGE_31 not applicable not applicable not applicable 897.6735
flowers flowers stage 10/11 Wt 21+ days ATGE_32 not applicable not applicable not applicable 987.4616
flowers flowers stage 12 Wt 21+ days ATGE_33 not applicable not applicable not applicable 1458.5721
flowers flower stage 12; multi-carpel gynoeceum; enlarged meristem; increased organ number clv3-7 21+ days ATGE_53 not applicable not applicable not applicable 1432.7275
flowers flower stage 12; shoot characteristics; most organs leaf-like lfy-12 21+ days ATGE_54 not applicable not applicable not applicable 996.4804
flowers flower stage 12; sepals replaced by leaf-like organs, petals mostly lacking, has secondary flowers ap1-15 21+ days ATGE_55 not applicable not applicable not applicable 804.6986
flowers flower stage 12; no sepals or petals ap2-6 21+ days ATGE_56 not applicable not applicable not applicable 1045.1182
flowers flower stage 12; filamentous organs in whorls two and three ufo-1 21+ days ATGE_59 not applicable not applicable not applicable 1018.2021
flowers flower stage 12; no petals or stamens ap3-6 21+ days ATGE_57 not applicable not applicable not applicable 1127.6155
flowers flower stage 12; no stamens or carpels ag-12 21+ days ATGE_58 not applicable not applicable not applicable 1150.0401
flowers flowers stage 15 Wt 21+ days ATGE_39 not applicable not applicable not applicable 991.0968
flowers flower Wt 28 days ATGE_92 not applicable not applicable not applicable 1021.5808
floral organs flowers stage 15, pedicels Wt 21+ days ATGE_40 not applicable not applicable not applicable 1474.2752
floral organs flowers stage 12, sepals Wt 21+ days ATGE_34 not applicable not applicable not applicable 1448.0633
floral organs flowers stage 15, sepals Wt 21+ days ATGE_41 not applicable not applicable not applicable 1002.8230
floral organs flowers stage 12, petals Wt 21+ days ATGE_35 not applicable not applicable not applicable 1094.7488
floral organs flowers stage 15, petals Wt 21+ days ATGE_42 not applicable not applicable not applicable 779.9584
floral organs flowers stage 12, stamens Wt 21+ days ATGE_36 not applicable not applicable not applicable 2932.7138
floral organs flowers stage 15, stamen Wt 21+ days ATGE_43 not applicable not applicable not applicable 878.6350
floral organs mature pollen Wt 6 wk ATGE_73 not applicable not applicable not applicable 1270.7585
floral organs flowers stage 12, carpels Wt 21+ days ATGE_37 not applicable not applicable not applicable 1116.7573
floral organs flowers stage 15, carpels Wt 21+ days ATGE_45 not applicable not applicable not applicable 1270.0883
seeds siliques, w/ seeds stage 3; mid globular to early heart embryos Wt 8 wk ATGE_76 not applicable not applicable not applicable 1451.8290
seeds siliques, w/ seeds stage 4; early to late heart embryos Wt 8 wk ATGE_77 not applicable not applicable not applicable 962.1156
seeds siliques, w/ seeds stage 5; late heart to mid torpedo embryos Wt 8 wk ATGE_78 not applicable not applicable not applicable 914.3485
seeds seeds, stage 6, w/o siliques; mid to late torpedo embryos Wt 8 wk ATGE_79 not applicable not applicable not applicable 923.9098
seeds seeds, stage 7, w/o siliques; late torpedo to early walking-stick embryos Wt 8 wk ATGE_81 not applicable not applicable not applicable 830.3956
seeds seeds, stage 8, w/o siliques; walking-stick to early curled cotyledons embryos Wt 8 wk ATGE_82 not applicable not applicable not applicable 448.2301
seeds seeds, stage 9, w/o siliques; curled cotyledons to early green cotyledons embryos Wt 8 wk ATGE_83 not applicable not applicable not applicable 458.5957
seeds seeds, stage 10, w/o siliques; green cotyledons embryos Wt 8 wk ATGE_84 not applicable not applicable not applicable 378.6084


get table as tab-delimited text file


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