AtGenExpress Visualization Tool (AVT)


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enter desired AGI or Affymetrix identifiers (comma
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254595_at; then press "Run"

AtGenExpress
coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord

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Schmid, M., Davison, T.S., Henz, S.R., Pape, U.J., Demar, M., Vingron, M.,
Schölkopf, B., Weigel, D. and Lohmann, J.U. (2005). A gene expression
map of Arabidopsis thaliana development. Nat. Genet. 37, 501-6.

back to AtGenExpress main page Explanation to samples and expression values

developer: Christian K. Widmer

get table as tab-delimited text file


tissue cluster tissue genotype age sample Id stress time treatment expression value for 261583_at (at1g01090)
root roots Wt 7 days ATGE_3 not applicable not applicable not applicable 2441.2746
root roots Wt 17 days ATGE_9 not applicable not applicable not applicable 2317.8967
root root Wt 15 days ATGE_93 not applicable not applicable not applicable 2569.1922
root root Wt 8 days ATGE_94 not applicable not applicable not applicable 2445.9870
root root Wt 8 days ATGE_95 not applicable not applicable not applicable 2535.8911
root root Wt 21 days ATGE_98 not applicable not applicable not applicable 1546.8095
root root Wt 21 days ATGE_99 not applicable not applicable not applicable 1346.3316
stem hypocotyl Wt 7 days ATGE_2 not applicable not applicable not applicable 2436.8059
stem 1st node Wt 21+ days ATGE_28 not applicable not applicable not applicable 1608.1449
stem stem, 2nd internode Wt 21+ days ATGE_27 not applicable not applicable not applicable 1376.4417
leaf cotyledons Wt 7 days ATGE_1 not applicable not applicable not applicable 1907.0155
leaf leaves 1 + 2 Wt 7 days ATGE_5 not applicable not applicable not applicable 3062.3517
leaf rosette leaf #4, 1 cm long Wt 10 days ATGE_10 not applicable not applicable not applicable 2790.5070
leaf rosette leaf #4, 1 cm long gl1-T 10 days ATGE_11 not applicable not applicable not applicable 2335.3326
leaf rosette leaf # 2 Wt 17 days ATGE_12 not applicable not applicable not applicable 1341.6004
leaf rosette leaf # 4 Wt 17 days ATGE_13 not applicable not applicable not applicable 1659.0278
leaf rosette leaf # 6 Wt 17 days ATGE_14 not applicable not applicable not applicable 1863.2639
leaf rosette leaf # 8 Wt 17 days ATGE_15 not applicable not applicable not applicable 2148.2259
leaf rosette leaf # 10 Wt 17 days ATGE_16 not applicable not applicable not applicable 2272.0048
leaf rosette leaf # 12 Wt 17 days ATGE_17 not applicable not applicable not applicable 2288.6185
leaf rosette leaf # 12 gl1-T 17 days ATGE_18 not applicable not applicable not applicable 2183.8589
leaf leaf 7, petiole Wt 17 days ATGE_19 not applicable not applicable not applicable 2205.1471
leaf leaf 7, proximal half Wt 17 days ATGE_20 not applicable not applicable not applicable 2040.0934
leaf leaf 7, distal half Wt 17 days ATGE_21 not applicable not applicable not applicable 1858.8374
leaf leaf Wt 15 days ATGE_91 not applicable not applicable not applicable 2604.1502
leaf senescing leaves Wt 35 days ATGE_25 not applicable not applicable not applicable 1226.3166
leaf cauline leaves Wt 21+ days ATGE_26 not applicable not applicable not applicable 1747.9415
whole plant seedling, green parts Wt 7 days ATGE_7 not applicable not applicable not applicable 3112.9654
whole plant seedling, green parts Wt 8 days ATGE_96 not applicable not applicable not applicable 2872.8747
whole plant seedling, green parts Wt 8 days ATGE_97 not applicable not applicable not applicable 2306.6482
whole plant seedling, green parts Wt 21 days ATGE_100 not applicable not applicable not applicable 1893.8629
whole plant seedling, green parts Wt 21 days ATGE_101 not applicable not applicable not applicable 2013.4807
whole plant developmental drift, entire rosette after transition to flowering, but before bolting Wt 21 days ATGE_22 not applicable not applicable not applicable 1959.3604
whole plant as above Wt 22 days ATGE_23 not applicable not applicable not applicable 2066.8414
whole plant as above Wt 23 days ATGE_24 not applicable not applicable not applicable 2012.0133
whole plant vegetative rosette Wt 7 days ATGE_87 not applicable not applicable not applicable 2808.1075
whole plant vegetative rosette Wt 14 days ATGE_89 not applicable not applicable not applicable 3040.6779
whole plant vegetative rosette Wt 21 days ATGE_90 not applicable not applicable not applicable 2935.5952
apex shoot apex, vegetative + young leaves Wt 7 days ATGE_4 not applicable not applicable not applicable 2863.0464
apex shoot apex, vegetative Wt 7 days ATGE_6 not applicable not applicable not applicable 2742.6963
apex shoot apex, transition (before bolting) Wt 14 days ATGE_8 not applicable not applicable not applicable 1628.7454
apex shoot apex, inflorescence (after bolting) Wt 21 days ATGE_29 not applicable not applicable not applicable 1881.6778
apex shoot apex, inflorescence (after bolting) clv3-7 21+ days ATGE_46 not applicable not applicable not applicable 1519.5616
apex shoot apex, inflorescence (after bolting) lfy-12 21+ days ATGE_47 not applicable not applicable not applicable 1716.6734
apex shoot apex, inflorescence (after bolting) ap1-15 21+ days ATGE_48 not applicable not applicable not applicable 1395.0464
apex shoot apex, inflorescence (after bolting) ap2-6 21+ days ATGE_49 not applicable not applicable not applicable 1584.3321
apex shoot apex, inflorescence (after bolting) ufo-1 21+ days ATGE_52 not applicable not applicable not applicable 1647.4899
apex shoot apex, inflorescence (after bolting) ap3-6 21+ days ATGE_50 not applicable not applicable not applicable 1687.6009
apex shoot apex, inflorescence (after bolting) ag-12 21+ days ATGE_51 not applicable not applicable not applicable 1841.3886
flowers flowers stage 9 Wt 21+ days ATGE_31 not applicable not applicable not applicable 2666.9534
flowers flowers stage 10/11 Wt 21+ days ATGE_32 not applicable not applicable not applicable 2846.1037
flowers flowers stage 12 Wt 21+ days ATGE_33 not applicable not applicable not applicable 3378.5492
flowers flower stage 12; multi-carpel gynoeceum; enlarged meristem; increased organ number clv3-7 21+ days ATGE_53 not applicable not applicable not applicable 2889.1910
flowers flower stage 12; shoot characteristics; most organs leaf-like lfy-12 21+ days ATGE_54 not applicable not applicable not applicable 2104.4635
flowers flower stage 12; sepals replaced by leaf-like organs, petals mostly lacking, has secondary flowers ap1-15 21+ days ATGE_55 not applicable not applicable not applicable 2267.9751
flowers flower stage 12; no sepals or petals ap2-6 21+ days ATGE_56 not applicable not applicable not applicable 2090.1836
flowers flower stage 12; filamentous organs in whorls two and three ufo-1 21+ days ATGE_59 not applicable not applicable not applicable 2291.8147
flowers flower stage 12; no petals or stamens ap3-6 21+ days ATGE_57 not applicable not applicable not applicable 2391.1991
flowers flower stage 12; no stamens or carpels ag-12 21+ days ATGE_58 not applicable not applicable not applicable 4040.0862
flowers flowers stage 15 Wt 21+ days ATGE_39 not applicable not applicable not applicable 2273.7689
flowers flower Wt 28 days ATGE_92 not applicable not applicable not applicable 2754.5651
floral organs flowers stage 15, pedicels Wt 21+ days ATGE_40 not applicable not applicable not applicable 2763.4185
floral organs flowers stage 12, sepals Wt 21+ days ATGE_34 not applicable not applicable not applicable 1847.3693
floral organs flowers stage 15, sepals Wt 21+ days ATGE_41 not applicable not applicable not applicable 960.1344
floral organs flowers stage 12, petals Wt 21+ days ATGE_35 not applicable not applicable not applicable 10873.2875
floral organs flowers stage 15, petals Wt 21+ days ATGE_42 not applicable not applicable not applicable 2869.7091
floral organs flowers stage 12, stamens Wt 21+ days ATGE_36 not applicable not applicable not applicable 2508.1316
floral organs flowers stage 15, stamen Wt 21+ days ATGE_43 not applicable not applicable not applicable 4140.5141
floral organs mature pollen Wt 6 wk ATGE_73 not applicable not applicable not applicable 734.9878
floral organs flowers stage 12, carpels Wt 21+ days ATGE_37 not applicable not applicable not applicable 2417.4817
floral organs flowers stage 15, carpels Wt 21+ days ATGE_45 not applicable not applicable not applicable 2428.5798
seeds siliques, w/ seeds stage 3; mid globular to early heart embryos Wt 8 wk ATGE_76 not applicable not applicable not applicable 1958.4542
seeds siliques, w/ seeds stage 4; early to late heart embryos Wt 8 wk ATGE_77 not applicable not applicable not applicable 5502.6763
seeds siliques, w/ seeds stage 5; late heart to mid torpedo embryos Wt 8 wk ATGE_78 not applicable not applicable not applicable 7381.4116
seeds seeds, stage 6, w/o siliques; mid to late torpedo embryos Wt 8 wk ATGE_79 not applicable not applicable not applicable 7964.5038
seeds seeds, stage 7, w/o siliques; late torpedo to early walking-stick embryos Wt 8 wk ATGE_81 not applicable not applicable not applicable 6043.5015
seeds seeds, stage 8, w/o siliques; walking-stick to early curled cotyledons embryos Wt 8 wk ATGE_82 not applicable not applicable not applicable 2314.5344
seeds seeds, stage 9, w/o siliques; curled cotyledons to early green cotyledons embryos Wt 8 wk ATGE_83 not applicable not applicable not applicable 1267.8393
seeds seeds, stage 10, w/o siliques; green cotyledons embryos Wt 8 wk ATGE_84 not applicable not applicable not applicable 927.3243


get table as tab-delimited text file


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