AtGenExpress Visualization Tool (AVT)


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enter desired AGI or Affymetrix identifiers (comma
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254595_at; then press "Run"

AtGenExpress
coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord

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Schmid, M., Davison, T.S., Henz, S.R., Pape, U.J., Demar, M., Vingron, M.,
Schölkopf, B., Weigel, D. and Lohmann, J.U. (2005). A gene expression
map of Arabidopsis thaliana development. Nat. Genet. 37, 501-6.

back to AtGenExpress main page Explanation to samples and expression values

developer: Christian K. Widmer

get table as tab-delimited text file


tissue cluster tissue genotype age sample Id stress time treatment expression value for 262290_at (at1g70985)
root roots Wt 7 days ATGE_3 not applicable not applicable not applicable 24.8266
root roots Wt 17 days ATGE_9 not applicable not applicable not applicable 27.9057
root root Wt 15 days ATGE_93 not applicable not applicable not applicable 29.4404
root root Wt 8 days ATGE_94 not applicable not applicable not applicable 27.6014
root root Wt 8 days ATGE_95 not applicable not applicable not applicable 35.9869
root root Wt 21 days ATGE_98 not applicable not applicable not applicable 26.8817
root root Wt 21 days ATGE_99 not applicable not applicable not applicable 24.4117
stem hypocotyl Wt 7 days ATGE_2 not applicable not applicable not applicable 21.7950
stem 1st node Wt 21+ days ATGE_28 not applicable not applicable not applicable 34.2458
stem stem, 2nd internode Wt 21+ days ATGE_27 not applicable not applicable not applicable 36.1326
leaf cotyledons Wt 7 days ATGE_1 not applicable not applicable not applicable 111.7052
leaf leaves 1 + 2 Wt 7 days ATGE_5 not applicable not applicable not applicable 95.6887
leaf rosette leaf #4, 1 cm long Wt 10 days ATGE_10 not applicable not applicable not applicable 138.9880
leaf rosette leaf #4, 1 cm long gl1-T 10 days ATGE_11 not applicable not applicable not applicable 80.2545
leaf rosette leaf # 2 Wt 17 days ATGE_12 not applicable not applicable not applicable 90.6000
leaf rosette leaf # 4 Wt 17 days ATGE_13 not applicable not applicable not applicable 84.0510
leaf rosette leaf # 6 Wt 17 days ATGE_14 not applicable not applicable not applicable 113.6951
leaf rosette leaf # 8 Wt 17 days ATGE_15 not applicable not applicable not applicable 91.9188
leaf rosette leaf # 10 Wt 17 days ATGE_16 not applicable not applicable not applicable 89.6158
leaf rosette leaf # 12 Wt 17 days ATGE_17 not applicable not applicable not applicable 53.7959
leaf rosette leaf # 12 gl1-T 17 days ATGE_18 not applicable not applicable not applicable 50.1107
leaf leaf 7, petiole Wt 17 days ATGE_19 not applicable not applicable not applicable 36.5390
leaf leaf 7, proximal half Wt 17 days ATGE_20 not applicable not applicable not applicable 104.8983
leaf leaf 7, distal half Wt 17 days ATGE_21 not applicable not applicable not applicable 72.8726
leaf leaf Wt 15 days ATGE_91 not applicable not applicable not applicable 115.9689
leaf senescing leaves Wt 35 days ATGE_25 not applicable not applicable not applicable 21.6518
leaf cauline leaves Wt 21+ days ATGE_26 not applicable not applicable not applicable 70.6961
whole plant seedling, green parts Wt 7 days ATGE_7 not applicable not applicable not applicable 76.2044
whole plant seedling, green parts Wt 8 days ATGE_96 not applicable not applicable not applicable 180.8880
whole plant seedling, green parts Wt 8 days ATGE_97 not applicable not applicable not applicable 180.9554
whole plant seedling, green parts Wt 21 days ATGE_100 not applicable not applicable not applicable 134.9928
whole plant seedling, green parts Wt 21 days ATGE_101 not applicable not applicable not applicable 83.8496
whole plant developmental drift, entire rosette after transition to flowering, but before bolting Wt 21 days ATGE_22 not applicable not applicable not applicable 41.4498
whole plant as above Wt 22 days ATGE_23 not applicable not applicable not applicable 56.9153
whole plant as above Wt 23 days ATGE_24 not applicable not applicable not applicable 47.8555
whole plant vegetative rosette Wt 7 days ATGE_87 not applicable not applicable not applicable 213.8368
whole plant vegetative rosette Wt 14 days ATGE_89 not applicable not applicable not applicable 54.0545
whole plant vegetative rosette Wt 21 days ATGE_90 not applicable not applicable not applicable 34.3922
apex shoot apex, vegetative + young leaves Wt 7 days ATGE_4 not applicable not applicable not applicable 25.6666
apex shoot apex, vegetative Wt 7 days ATGE_6 not applicable not applicable not applicable 18.3675
apex shoot apex, transition (before bolting) Wt 14 days ATGE_8 not applicable not applicable not applicable 20.4633
apex shoot apex, inflorescence (after bolting) Wt 21 days ATGE_29 not applicable not applicable not applicable 20.8618
apex shoot apex, inflorescence (after bolting) clv3-7 21+ days ATGE_46 not applicable not applicable not applicable 17.8661
apex shoot apex, inflorescence (after bolting) lfy-12 21+ days ATGE_47 not applicable not applicable not applicable 22.1537
apex shoot apex, inflorescence (after bolting) ap1-15 21+ days ATGE_48 not applicable not applicable not applicable 17.3919
apex shoot apex, inflorescence (after bolting) ap2-6 21+ days ATGE_49 not applicable not applicable not applicable 19.1177
apex shoot apex, inflorescence (after bolting) ufo-1 21+ days ATGE_52 not applicable not applicable not applicable 20.4217
apex shoot apex, inflorescence (after bolting) ap3-6 21+ days ATGE_50 not applicable not applicable not applicable 19.4177
apex shoot apex, inflorescence (after bolting) ag-12 21+ days ATGE_51 not applicable not applicable not applicable 17.1479
flowers flowers stage 9 Wt 21+ days ATGE_31 not applicable not applicable not applicable 20.9171
flowers flowers stage 10/11 Wt 21+ days ATGE_32 not applicable not applicable not applicable 21.4797
flowers flowers stage 12 Wt 21+ days ATGE_33 not applicable not applicable not applicable 23.6815
flowers flower stage 12; multi-carpel gynoeceum; enlarged meristem; increased organ number clv3-7 21+ days ATGE_53 not applicable not applicable not applicable 16.6112
flowers flower stage 12; shoot characteristics; most organs leaf-like lfy-12 21+ days ATGE_54 not applicable not applicable not applicable 26.2449
flowers flower stage 12; sepals replaced by leaf-like organs, petals mostly lacking, has secondary flowers ap1-15 21+ days ATGE_55 not applicable not applicable not applicable 19.3277
flowers flower stage 12; no sepals or petals ap2-6 21+ days ATGE_56 not applicable not applicable not applicable 22.2490
flowers flower stage 12; filamentous organs in whorls two and three ufo-1 21+ days ATGE_59 not applicable not applicable not applicable 25.0733
flowers flower stage 12; no petals or stamens ap3-6 21+ days ATGE_57 not applicable not applicable not applicable 23.8408
flowers flower stage 12; no stamens or carpels ag-12 21+ days ATGE_58 not applicable not applicable not applicable 16.9779
flowers flowers stage 15 Wt 21+ days ATGE_39 not applicable not applicable not applicable 30.9986
flowers flower Wt 28 days ATGE_92 not applicable not applicable not applicable 21.0832
floral organs flowers stage 15, pedicels Wt 21+ days ATGE_40 not applicable not applicable not applicable 92.7714
floral organs flowers stage 12, sepals Wt 21+ days ATGE_34 not applicable not applicable not applicable 35.0217
floral organs flowers stage 15, sepals Wt 21+ days ATGE_41 not applicable not applicable not applicable 27.9827
floral organs flowers stage 12, petals Wt 21+ days ATGE_35 not applicable not applicable not applicable 19.0848
floral organs flowers stage 15, petals Wt 21+ days ATGE_42 not applicable not applicable not applicable 15.2672
floral organs flowers stage 12, stamens Wt 21+ days ATGE_36 not applicable not applicable not applicable 18.9467
floral organs flowers stage 15, stamen Wt 21+ days ATGE_43 not applicable not applicable not applicable 27.5076
floral organs mature pollen Wt 6 wk ATGE_73 not applicable not applicable not applicable 147.1463
floral organs flowers stage 12, carpels Wt 21+ days ATGE_37 not applicable not applicable not applicable 29.9687
floral organs flowers stage 15, carpels Wt 21+ days ATGE_45 not applicable not applicable not applicable 47.1389
seeds siliques, w/ seeds stage 3; mid globular to early heart embryos Wt 8 wk ATGE_76 not applicable not applicable not applicable 232.1527
seeds siliques, w/ seeds stage 4; early to late heart embryos Wt 8 wk ATGE_77 not applicable not applicable not applicable 90.5134
seeds siliques, w/ seeds stage 5; late heart to mid torpedo embryos Wt 8 wk ATGE_78 not applicable not applicable not applicable 65.8357
seeds seeds, stage 6, w/o siliques; mid to late torpedo embryos Wt 8 wk ATGE_79 not applicable not applicable not applicable 312.6396
seeds seeds, stage 7, w/o siliques; late torpedo to early walking-stick embryos Wt 8 wk ATGE_81 not applicable not applicable not applicable 1081.9430
seeds seeds, stage 8, w/o siliques; walking-stick to early curled cotyledons embryos Wt 8 wk ATGE_82 not applicable not applicable not applicable 3997.0259
seeds seeds, stage 9, w/o siliques; curled cotyledons to early green cotyledons embryos Wt 8 wk ATGE_83 not applicable not applicable not applicable 3393.2047
seeds seeds, stage 10, w/o siliques; green cotyledons embryos Wt 8 wk ATGE_84 not applicable not applicable not applicable 5305.1239


get table as tab-delimited text file