AtGenExpress Visualization Tool (AVT)


Select experiment
Select normalization        only create tab-delimited file
Select genes
enter desired AGI or Affymetrix identifiers (comma
separated), e.g.:At5G61850, At5G57090, At1G29910,
254595_at; then press "Run"

AtGenExpress
coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord

Mouse over for sample and expression information.
plot
Schmid, M., Davison, T.S., Henz, S.R., Pape, U.J., Demar, M., Vingron, M.,
Schölkopf, B., Weigel, D. and Lohmann, J.U. (2005). A gene expression
map of Arabidopsis thaliana development. Nat. Genet. 37, 501-6.

back to AtGenExpress main page Explanation to samples and expression values

developer: Christian K. Widmer

get table as tab-delimited text file


tissue cluster tissue genotype age sample Id stress time treatment expression value for 253959_at (at4g26410)
root roots Wt 7 days ATGE_3 not applicable not applicable not applicable 784.4585
root roots Wt 17 days ATGE_9 not applicable not applicable not applicable 668.8703
root root Wt 15 days ATGE_93 not applicable not applicable not applicable 708.3030
root root Wt 8 days ATGE_94 not applicable not applicable not applicable 562.5247
root root Wt 8 days ATGE_95 not applicable not applicable not applicable 600.4391
root root Wt 21 days ATGE_98 not applicable not applicable not applicable 513.2589
root root Wt 21 days ATGE_99 not applicable not applicable not applicable 537.0068
stem hypocotyl Wt 7 days ATGE_2 not applicable not applicable not applicable 546.4100
stem 1st node Wt 21+ days ATGE_28 not applicable not applicable not applicable 557.8308
stem stem, 2nd internode Wt 21+ days ATGE_27 not applicable not applicable not applicable 501.8997
leaf cotyledons Wt 7 days ATGE_1 not applicable not applicable not applicable 583.5395
leaf leaves 1 + 2 Wt 7 days ATGE_5 not applicable not applicable not applicable 676.0871
leaf rosette leaf #4, 1 cm long Wt 10 days ATGE_10 not applicable not applicable not applicable 746.8727
leaf rosette leaf #4, 1 cm long gl1-T 10 days ATGE_11 not applicable not applicable not applicable 649.4078
leaf rosette leaf # 2 Wt 17 days ATGE_12 not applicable not applicable not applicable 470.0804
leaf rosette leaf # 4 Wt 17 days ATGE_13 not applicable not applicable not applicable 499.1674
leaf rosette leaf # 6 Wt 17 days ATGE_14 not applicable not applicable not applicable 555.9074
leaf rosette leaf # 8 Wt 17 days ATGE_15 not applicable not applicable not applicable 607.6208
leaf rosette leaf # 10 Wt 17 days ATGE_16 not applicable not applicable not applicable 633.5153
leaf rosette leaf # 12 Wt 17 days ATGE_17 not applicable not applicable not applicable 688.8976
leaf rosette leaf # 12 gl1-T 17 days ATGE_18 not applicable not applicable not applicable 687.3766
leaf leaf 7, petiole Wt 17 days ATGE_19 not applicable not applicable not applicable 549.7008
leaf leaf 7, proximal half Wt 17 days ATGE_20 not applicable not applicable not applicable 575.1148
leaf leaf 7, distal half Wt 17 days ATGE_21 not applicable not applicable not applicable 541.9802
leaf leaf Wt 15 days ATGE_91 not applicable not applicable not applicable 586.6800
leaf senescing leaves Wt 35 days ATGE_25 not applicable not applicable not applicable 385.1344
leaf cauline leaves Wt 21+ days ATGE_26 not applicable not applicable not applicable 438.2869
whole plant seedling, green parts Wt 7 days ATGE_7 not applicable not applicable not applicable 638.0396
whole plant seedling, green parts Wt 8 days ATGE_96 not applicable not applicable not applicable 555.7064
whole plant seedling, green parts Wt 8 days ATGE_97 not applicable not applicable not applicable 524.7293
whole plant seedling, green parts Wt 21 days ATGE_100 not applicable not applicable not applicable 503.0872
whole plant seedling, green parts Wt 21 days ATGE_101 not applicable not applicable not applicable 483.9976
whole plant developmental drift, entire rosette after transition to flowering, but before bolting Wt 21 days ATGE_22 not applicable not applicable not applicable 584.2803
whole plant as above Wt 22 days ATGE_23 not applicable not applicable not applicable 637.5751
whole plant as above Wt 23 days ATGE_24 not applicable not applicable not applicable 600.3279
whole plant vegetative rosette Wt 7 days ATGE_87 not applicable not applicable not applicable 728.8775
whole plant vegetative rosette Wt 14 days ATGE_89 not applicable not applicable not applicable 724.3144
whole plant vegetative rosette Wt 21 days ATGE_90 not applicable not applicable not applicable 716.2044
apex shoot apex, vegetative + young leaves Wt 7 days ATGE_4 not applicable not applicable not applicable 747.3647
apex shoot apex, vegetative Wt 7 days ATGE_6 not applicable not applicable not applicable 800.2156
apex shoot apex, transition (before bolting) Wt 14 days ATGE_8 not applicable not applicable not applicable 846.3558
apex shoot apex, inflorescence (after bolting) Wt 21 days ATGE_29 not applicable not applicable not applicable 701.7881
apex shoot apex, inflorescence (after bolting) clv3-7 21+ days ATGE_46 not applicable not applicable not applicable 809.9927
apex shoot apex, inflorescence (after bolting) lfy-12 21+ days ATGE_47 not applicable not applicable not applicable 729.2447
apex shoot apex, inflorescence (after bolting) ap1-15 21+ days ATGE_48 not applicable not applicable not applicable 801.5971
apex shoot apex, inflorescence (after bolting) ap2-6 21+ days ATGE_49 not applicable not applicable not applicable 727.7561
apex shoot apex, inflorescence (after bolting) ufo-1 21+ days ATGE_52 not applicable not applicable not applicable 772.3875
apex shoot apex, inflorescence (after bolting) ap3-6 21+ days ATGE_50 not applicable not applicable not applicable 692.0072
apex shoot apex, inflorescence (after bolting) ag-12 21+ days ATGE_51 not applicable not applicable not applicable 684.5508
flowers flowers stage 9 Wt 21+ days ATGE_31 not applicable not applicable not applicable 782.3451
flowers flowers stage 10/11 Wt 21+ days ATGE_32 not applicable not applicable not applicable 586.2310
flowers flowers stage 12 Wt 21+ days ATGE_33 not applicable not applicable not applicable 633.6014
flowers flower stage 12; multi-carpel gynoeceum; enlarged meristem; increased organ number clv3-7 21+ days ATGE_53 not applicable not applicable not applicable 601.4498
flowers flower stage 12; shoot characteristics; most organs leaf-like lfy-12 21+ days ATGE_54 not applicable not applicable not applicable 610.4587
flowers flower stage 12; sepals replaced by leaf-like organs, petals mostly lacking, has secondary flowers ap1-15 21+ days ATGE_55 not applicable not applicable not applicable 550.1465
flowers flower stage 12; no sepals or petals ap2-6 21+ days ATGE_56 not applicable not applicable not applicable 590.5260
flowers flower stage 12; filamentous organs in whorls two and three ufo-1 21+ days ATGE_59 not applicable not applicable not applicable 574.4459
flowers flower stage 12; no petals or stamens ap3-6 21+ days ATGE_57 not applicable not applicable not applicable 519.2901
flowers flower stage 12; no stamens or carpels ag-12 21+ days ATGE_58 not applicable not applicable not applicable 590.5896
flowers flowers stage 15 Wt 21+ days ATGE_39 not applicable not applicable not applicable 480.3905
flowers flower Wt 28 days ATGE_92 not applicable not applicable not applicable 613.5400
floral organs flowers stage 15, pedicels Wt 21+ days ATGE_40 not applicable not applicable not applicable 636.3026
floral organs flowers stage 12, sepals Wt 21+ days ATGE_34 not applicable not applicable not applicable 612.4513
floral organs flowers stage 15, sepals Wt 21+ days ATGE_41 not applicable not applicable not applicable 584.5102
floral organs flowers stage 12, petals Wt 21+ days ATGE_35 not applicable not applicable not applicable 598.8013
floral organs flowers stage 15, petals Wt 21+ days ATGE_42 not applicable not applicable not applicable 450.1238
floral organs flowers stage 12, stamens Wt 21+ days ATGE_36 not applicable not applicable not applicable 617.0946
floral organs flowers stage 15, stamen Wt 21+ days ATGE_43 not applicable not applicable not applicable 429.8095
floral organs mature pollen Wt 6 wk ATGE_73 not applicable not applicable not applicable 886.7290
floral organs flowers stage 12, carpels Wt 21+ days ATGE_37 not applicable not applicable not applicable 606.0560
floral organs flowers stage 15, carpels Wt 21+ days ATGE_45 not applicable not applicable not applicable 626.4834
seeds siliques, w/ seeds stage 3; mid globular to early heart embryos Wt 8 wk ATGE_76 not applicable not applicable not applicable 524.1352
seeds siliques, w/ seeds stage 4; early to late heart embryos Wt 8 wk ATGE_77 not applicable not applicable not applicable 501.8246
seeds siliques, w/ seeds stage 5; late heart to mid torpedo embryos Wt 8 wk ATGE_78 not applicable not applicable not applicable 523.9397
seeds seeds, stage 6, w/o siliques; mid to late torpedo embryos Wt 8 wk ATGE_79 not applicable not applicable not applicable 557.7218
seeds seeds, stage 7, w/o siliques; late torpedo to early walking-stick embryos Wt 8 wk ATGE_81 not applicable not applicable not applicable 511.3824
seeds seeds, stage 8, w/o siliques; walking-stick to early curled cotyledons embryos Wt 8 wk ATGE_82 not applicable not applicable not applicable 656.8613
seeds seeds, stage 9, w/o siliques; curled cotyledons to early green cotyledons embryos Wt 8 wk ATGE_83 not applicable not applicable not applicable 626.7508
seeds seeds, stage 10, w/o siliques; green cotyledons embryos Wt 8 wk ATGE_84 not applicable not applicable not applicable 743.9022


get table as tab-delimited text file


weigelworld.org | Datenschutzerklärung | Impressum