AtGenExpress Visualization Tool (AVT)


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enter desired AGI or Affymetrix identifiers (comma
separated), e.g.:At5G61850, At5G57090, At1G29910,
254595_at; then press "Run"

AtGenExpress
coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord

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Schmid, M., Davison, T.S., Henz, S.R., Pape, U.J., Demar, M., Vingron, M.,
Schölkopf, B., Weigel, D. and Lohmann, J.U. (2005). A gene expression
map of Arabidopsis thaliana development. Nat. Genet. 37, 501-6.

back to AtGenExpress main page Explanation to samples and expression values

developer: Christian K. Widmer

get table as tab-delimited text file


tissue cluster tissue genotype age sample Id stress time treatment expression value for 263013_at (at1g23380)
root roots Wt 7 days ATGE_3 not applicable not applicable not applicable 20.4772
root roots Wt 17 days ATGE_9 not applicable not applicable not applicable 17.5534
root root Wt 15 days ATGE_93 not applicable not applicable not applicable 31.5478
root root Wt 8 days ATGE_94 not applicable not applicable not applicable 59.2124
root root Wt 8 days ATGE_95 not applicable not applicable not applicable 34.0380
root root Wt 21 days ATGE_98 not applicable not applicable not applicable 64.4889
root root Wt 21 days ATGE_99 not applicable not applicable not applicable 52.0438
stem hypocotyl Wt 7 days ATGE_2 not applicable not applicable not applicable 185.1528
stem 1st node Wt 21+ days ATGE_28 not applicable not applicable not applicable 169.1651
stem stem, 2nd internode Wt 21+ days ATGE_27 not applicable not applicable not applicable 104.0021
leaf cotyledons Wt 7 days ATGE_1 not applicable not applicable not applicable 12.5746
leaf leaves 1 + 2 Wt 7 days ATGE_5 not applicable not applicable not applicable 12.5946
leaf rosette leaf #4, 1 cm long Wt 10 days ATGE_10 not applicable not applicable not applicable 12.2291
leaf rosette leaf #4, 1 cm long gl1-T 10 days ATGE_11 not applicable not applicable not applicable 12.2823
leaf rosette leaf # 2 Wt 17 days ATGE_12 not applicable not applicable not applicable 11.8030
leaf rosette leaf # 4 Wt 17 days ATGE_13 not applicable not applicable not applicable 11.9889
leaf rosette leaf # 6 Wt 17 days ATGE_14 not applicable not applicable not applicable 13.2829
leaf rosette leaf # 8 Wt 17 days ATGE_15 not applicable not applicable not applicable 12.1183
leaf rosette leaf # 10 Wt 17 days ATGE_16 not applicable not applicable not applicable 12.4752
leaf rosette leaf # 12 Wt 17 days ATGE_17 not applicable not applicable not applicable 12.1479
leaf rosette leaf # 12 gl1-T 17 days ATGE_18 not applicable not applicable not applicable 12.0669
leaf leaf 7, petiole Wt 17 days ATGE_19 not applicable not applicable not applicable 12.7957
leaf leaf 7, proximal half Wt 17 days ATGE_20 not applicable not applicable not applicable 12.5636
leaf leaf 7, distal half Wt 17 days ATGE_21 not applicable not applicable not applicable 12.9373
leaf leaf Wt 15 days ATGE_91 not applicable not applicable not applicable 13.0689
leaf senescing leaves Wt 35 days ATGE_25 not applicable not applicable not applicable 10.9546
leaf cauline leaves Wt 21+ days ATGE_26 not applicable not applicable not applicable 12.0434
whole plant seedling, green parts Wt 7 days ATGE_7 not applicable not applicable not applicable 15.5973
whole plant seedling, green parts Wt 8 days ATGE_96 not applicable not applicable not applicable 19.7246
whole plant seedling, green parts Wt 8 days ATGE_97 not applicable not applicable not applicable 17.1755
whole plant seedling, green parts Wt 21 days ATGE_100 not applicable not applicable not applicable 20.1841
whole plant seedling, green parts Wt 21 days ATGE_101 not applicable not applicable not applicable 25.8887
whole plant developmental drift, entire rosette after transition to flowering, but before bolting Wt 21 days ATGE_22 not applicable not applicable not applicable 22.9928
whole plant as above Wt 22 days ATGE_23 not applicable not applicable not applicable 18.0390
whole plant as above Wt 23 days ATGE_24 not applicable not applicable not applicable 16.9158
whole plant vegetative rosette Wt 7 days ATGE_87 not applicable not applicable not applicable 14.9825
whole plant vegetative rosette Wt 14 days ATGE_89 not applicable not applicable not applicable 13.0553
whole plant vegetative rosette Wt 21 days ATGE_90 not applicable not applicable not applicable 12.1843
apex shoot apex, vegetative + young leaves Wt 7 days ATGE_4 not applicable not applicable not applicable 28.3121
apex shoot apex, vegetative Wt 7 days ATGE_6 not applicable not applicable not applicable 66.9748
apex shoot apex, transition (before bolting) Wt 14 days ATGE_8 not applicable not applicable not applicable 172.6075
apex shoot apex, inflorescence (after bolting) Wt 21 days ATGE_29 not applicable not applicable not applicable 177.9364
apex shoot apex, inflorescence (after bolting) clv3-7 21+ days ATGE_46 not applicable not applicable not applicable 338.5442
apex shoot apex, inflorescence (after bolting) lfy-12 21+ days ATGE_47 not applicable not applicable not applicable 250.6268
apex shoot apex, inflorescence (after bolting) ap1-15 21+ days ATGE_48 not applicable not applicable not applicable 462.9518
apex shoot apex, inflorescence (after bolting) ap2-6 21+ days ATGE_49 not applicable not applicable not applicable 207.9443
apex shoot apex, inflorescence (after bolting) ufo-1 21+ days ATGE_52 not applicable not applicable not applicable 291.6163
apex shoot apex, inflorescence (after bolting) ap3-6 21+ days ATGE_50 not applicable not applicable not applicable 295.4725
apex shoot apex, inflorescence (after bolting) ag-12 21+ days ATGE_51 not applicable not applicable not applicable 242.0409
flowers flowers stage 9 Wt 21+ days ATGE_31 not applicable not applicable not applicable 58.9413
flowers flowers stage 10/11 Wt 21+ days ATGE_32 not applicable not applicable not applicable 34.8061
flowers flowers stage 12 Wt 21+ days ATGE_33 not applicable not applicable not applicable 23.0247
flowers flower stage 12; multi-carpel gynoeceum; enlarged meristem; increased organ number clv3-7 21+ days ATGE_53 not applicable not applicable not applicable 28.9063
flowers flower stage 12; shoot characteristics; most organs leaf-like lfy-12 21+ days ATGE_54 not applicable not applicable not applicable 101.8194
flowers flower stage 12; sepals replaced by leaf-like organs, petals mostly lacking, has secondary flowers ap1-15 21+ days ATGE_55 not applicable not applicable not applicable 78.3724
flowers flower stage 12; no sepals or petals ap2-6 21+ days ATGE_56 not applicable not applicable not applicable 39.4007
flowers flower stage 12; filamentous organs in whorls two and three ufo-1 21+ days ATGE_59 not applicable not applicable not applicable 36.1167
flowers flower stage 12; no petals or stamens ap3-6 21+ days ATGE_57 not applicable not applicable not applicable 42.8300
flowers flower stage 12; no stamens or carpels ag-12 21+ days ATGE_58 not applicable not applicable not applicable 85.5716
flowers flowers stage 15 Wt 21+ days ATGE_39 not applicable not applicable not applicable 16.2046
flowers flower Wt 28 days ATGE_92 not applicable not applicable not applicable 61.6378
floral organs flowers stage 15, pedicels Wt 21+ days ATGE_40 not applicable not applicable not applicable 78.1701
floral organs flowers stage 12, sepals Wt 21+ days ATGE_34 not applicable not applicable not applicable 11.6946
floral organs flowers stage 15, sepals Wt 21+ days ATGE_41 not applicable not applicable not applicable 13.0320
floral organs flowers stage 12, petals Wt 21+ days ATGE_35 not applicable not applicable not applicable 11.4202
floral organs flowers stage 15, petals Wt 21+ days ATGE_42 not applicable not applicable not applicable 11.5325
floral organs flowers stage 12, stamens Wt 21+ days ATGE_36 not applicable not applicable not applicable 12.8300
floral organs flowers stage 15, stamen Wt 21+ days ATGE_43 not applicable not applicable not applicable 15.1065
floral organs mature pollen Wt 6 wk ATGE_73 not applicable not applicable not applicable 17.9786
floral organs flowers stage 12, carpels Wt 21+ days ATGE_37 not applicable not applicable not applicable 16.9864
floral organs flowers stage 15, carpels Wt 21+ days ATGE_45 not applicable not applicable not applicable 11.4665
seeds siliques, w/ seeds stage 3; mid globular to early heart embryos Wt 8 wk ATGE_76 not applicable not applicable not applicable 17.7065
seeds siliques, w/ seeds stage 4; early to late heart embryos Wt 8 wk ATGE_77 not applicable not applicable not applicable 23.8445
seeds siliques, w/ seeds stage 5; late heart to mid torpedo embryos Wt 8 wk ATGE_78 not applicable not applicable not applicable 24.4624
seeds seeds, stage 6, w/o siliques; mid to late torpedo embryos Wt 8 wk ATGE_79 not applicable not applicable not applicable 37.3196
seeds seeds, stage 7, w/o siliques; late torpedo to early walking-stick embryos Wt 8 wk ATGE_81 not applicable not applicable not applicable 46.1642
seeds seeds, stage 8, w/o siliques; walking-stick to early curled cotyledons embryos Wt 8 wk ATGE_82 not applicable not applicable not applicable 46.2787
seeds seeds, stage 9, w/o siliques; curled cotyledons to early green cotyledons embryos Wt 8 wk ATGE_83 not applicable not applicable not applicable 34.6388
seeds seeds, stage 10, w/o siliques; green cotyledons embryos Wt 8 wk ATGE_84 not applicable not applicable not applicable 30.3080


get table as tab-delimited text file