AtGenExpress Visualization Tool (AVT)


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254595_at; then press "Run"

AtGenExpress
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Schmid, M., Davison, T.S., Henz, S.R., Pape, U.J., Demar, M., Vingron, M.,
Schölkopf, B., Weigel, D. and Lohmann, J.U. (2005). A gene expression
map of Arabidopsis thaliana development. Nat. Genet. 37, 501-6.

back to AtGenExpress main page Explanation to samples and expression values

developer: Christian K. Widmer

get table as tab-delimited text file


tissue cluster tissue genotype age sample Id stress time treatment expression value for 267271_at (at2g02540)
root roots Wt 7 days ATGE_3 not applicable not applicable not applicable 4.0958
root roots Wt 17 days ATGE_9 not applicable not applicable not applicable 4.2521
root root Wt 15 days ATGE_93 not applicable not applicable not applicable 4.8984
root root Wt 8 days ATGE_94 not applicable not applicable not applicable 6.4865
root root Wt 8 days ATGE_95 not applicable not applicable not applicable 7.1461
root root Wt 21 days ATGE_98 not applicable not applicable not applicable 5.1125
root root Wt 21 days ATGE_99 not applicable not applicable not applicable 5.5764
stem hypocotyl Wt 7 days ATGE_2 not applicable not applicable not applicable 7.3686
stem 1st node Wt 21+ days ATGE_28 not applicable not applicable not applicable 9.1513
stem stem, 2nd internode Wt 21+ days ATGE_27 not applicable not applicable not applicable 11.3747
leaf cotyledons Wt 7 days ATGE_1 not applicable not applicable not applicable 8.2266
leaf leaves 1 + 2 Wt 7 days ATGE_5 not applicable not applicable not applicable 16.0964
leaf rosette leaf #4, 1 cm long Wt 10 days ATGE_10 not applicable not applicable not applicable 18.7169
leaf rosette leaf #4, 1 cm long gl1-T 10 days ATGE_11 not applicable not applicable not applicable 14.5855
leaf rosette leaf # 2 Wt 17 days ATGE_12 not applicable not applicable not applicable 7.7518
leaf rosette leaf # 4 Wt 17 days ATGE_13 not applicable not applicable not applicable 8.4764
leaf rosette leaf # 6 Wt 17 days ATGE_14 not applicable not applicable not applicable 9.8702
leaf rosette leaf # 8 Wt 17 days ATGE_15 not applicable not applicable not applicable 11.0919
leaf rosette leaf # 10 Wt 17 days ATGE_16 not applicable not applicable not applicable 16.4773
leaf rosette leaf # 12 Wt 17 days ATGE_17 not applicable not applicable not applicable 30.9029
leaf rosette leaf # 12 gl1-T 17 days ATGE_18 not applicable not applicable not applicable 23.1300
leaf leaf 7, petiole Wt 17 days ATGE_19 not applicable not applicable not applicable 9.7261
leaf leaf 7, proximal half Wt 17 days ATGE_20 not applicable not applicable not applicable 8.3394
leaf leaf 7, distal half Wt 17 days ATGE_21 not applicable not applicable not applicable 6.6381
leaf leaf Wt 15 days ATGE_91 not applicable not applicable not applicable 16.1890
leaf senescing leaves Wt 35 days ATGE_25 not applicable not applicable not applicable 7.5746
leaf cauline leaves Wt 21+ days ATGE_26 not applicable not applicable not applicable 7.1937
whole plant seedling, green parts Wt 7 days ATGE_7 not applicable not applicable not applicable 33.9149
whole plant seedling, green parts Wt 8 days ATGE_96 not applicable not applicable not applicable 15.9854
whole plant seedling, green parts Wt 8 days ATGE_97 not applicable not applicable not applicable 14.6487
whole plant seedling, green parts Wt 21 days ATGE_100 not applicable not applicable not applicable 13.6163
whole plant seedling, green parts Wt 21 days ATGE_101 not applicable not applicable not applicable 11.0631
whole plant developmental drift, entire rosette after transition to flowering, but before bolting Wt 21 days ATGE_22 not applicable not applicable not applicable 9.6919
whole plant as above Wt 22 days ATGE_23 not applicable not applicable not applicable 12.3542
whole plant as above Wt 23 days ATGE_24 not applicable not applicable not applicable 10.9285
whole plant vegetative rosette Wt 7 days ATGE_87 not applicable not applicable not applicable 26.9254
whole plant vegetative rosette Wt 14 days ATGE_89 not applicable not applicable not applicable 50.2597
whole plant vegetative rosette Wt 21 days ATGE_90 not applicable not applicable not applicable 51.7642
apex shoot apex, vegetative + young leaves Wt 7 days ATGE_4 not applicable not applicable not applicable 51.0670
apex shoot apex, vegetative Wt 7 days ATGE_6 not applicable not applicable not applicable 78.0166
apex shoot apex, transition (before bolting) Wt 14 days ATGE_8 not applicable not applicable not applicable 113.7170
apex shoot apex, inflorescence (after bolting) Wt 21 days ATGE_29 not applicable not applicable not applicable 103.7003
apex shoot apex, inflorescence (after bolting) clv3-7 21+ days ATGE_46 not applicable not applicable not applicable 101.8398
apex shoot apex, inflorescence (after bolting) lfy-12 21+ days ATGE_47 not applicable not applicable not applicable 109.1050
apex shoot apex, inflorescence (after bolting) ap1-15 21+ days ATGE_48 not applicable not applicable not applicable 115.7200
apex shoot apex, inflorescence (after bolting) ap2-6 21+ days ATGE_49 not applicable not applicable not applicable 158.3172
apex shoot apex, inflorescence (after bolting) ufo-1 21+ days ATGE_52 not applicable not applicable not applicable 95.6112
apex shoot apex, inflorescence (after bolting) ap3-6 21+ days ATGE_50 not applicable not applicable not applicable 191.5994
apex shoot apex, inflorescence (after bolting) ag-12 21+ days ATGE_51 not applicable not applicable not applicable 134.0489
flowers flowers stage 9 Wt 21+ days ATGE_31 not applicable not applicable not applicable 76.3158
flowers flowers stage 10/11 Wt 21+ days ATGE_32 not applicable not applicable not applicable 71.9186
flowers flowers stage 12 Wt 21+ days ATGE_33 not applicable not applicable not applicable 35.1171
flowers flower stage 12; multi-carpel gynoeceum; enlarged meristem; increased organ number clv3-7 21+ days ATGE_53 not applicable not applicable not applicable 38.5239
flowers flower stage 12; shoot characteristics; most organs leaf-like lfy-12 21+ days ATGE_54 not applicable not applicable not applicable 81.0624
flowers flower stage 12; sepals replaced by leaf-like organs, petals mostly lacking, has secondary flowers ap1-15 21+ days ATGE_55 not applicable not applicable not applicable 47.1115
flowers flower stage 12; no sepals or petals ap2-6 21+ days ATGE_56 not applicable not applicable not applicable 107.9616
flowers flower stage 12; filamentous organs in whorls two and three ufo-1 21+ days ATGE_59 not applicable not applicable not applicable 50.9548
flowers flower stage 12; no petals or stamens ap3-6 21+ days ATGE_57 not applicable not applicable not applicable 71.4107
flowers flower stage 12; no stamens or carpels ag-12 21+ days ATGE_58 not applicable not applicable not applicable 54.5809
flowers flowers stage 15 Wt 21+ days ATGE_39 not applicable not applicable not applicable 12.2755
flowers flower Wt 28 days ATGE_92 not applicable not applicable not applicable 58.9212
floral organs flowers stage 15, pedicels Wt 21+ days ATGE_40 not applicable not applicable not applicable 7.7518
floral organs flowers stage 12, sepals Wt 21+ days ATGE_34 not applicable not applicable not applicable 12.1275
floral organs flowers stage 15, sepals Wt 21+ days ATGE_41 not applicable not applicable not applicable 5.8696
floral organs flowers stage 12, petals Wt 21+ days ATGE_35 not applicable not applicable not applicable 20.4720
floral organs flowers stage 15, petals Wt 21+ days ATGE_42 not applicable not applicable not applicable 9.0077
floral organs flowers stage 12, stamens Wt 21+ days ATGE_36 not applicable not applicable not applicable 15.6201
floral organs flowers stage 15, stamen Wt 21+ days ATGE_43 not applicable not applicable not applicable 7.7512
floral organs mature pollen Wt 6 wk ATGE_73 not applicable not applicable not applicable 7.9289
floral organs flowers stage 12, carpels Wt 21+ days ATGE_37 not applicable not applicable not applicable 51.3653
floral organs flowers stage 15, carpels Wt 21+ days ATGE_45 not applicable not applicable not applicable 25.3016
seeds siliques, w/ seeds stage 3; mid globular to early heart embryos Wt 8 wk ATGE_76 not applicable not applicable not applicable 8.8758
seeds siliques, w/ seeds stage 4; early to late heart embryos Wt 8 wk ATGE_77 not applicable not applicable not applicable 25.9232
seeds siliques, w/ seeds stage 5; late heart to mid torpedo embryos Wt 8 wk ATGE_78 not applicable not applicable not applicable 36.5397
seeds seeds, stage 6, w/o siliques; mid to late torpedo embryos Wt 8 wk ATGE_79 not applicable not applicable not applicable 54.8575
seeds seeds, stage 7, w/o siliques; late torpedo to early walking-stick embryos Wt 8 wk ATGE_81 not applicable not applicable not applicable 30.5018
seeds seeds, stage 8, w/o siliques; walking-stick to early curled cotyledons embryos Wt 8 wk ATGE_82 not applicable not applicable not applicable 6.8962
seeds seeds, stage 9, w/o siliques; curled cotyledons to early green cotyledons embryos Wt 8 wk ATGE_83 not applicable not applicable not applicable 7.0469
seeds seeds, stage 10, w/o siliques; green cotyledons embryos Wt 8 wk ATGE_84 not applicable not applicable not applicable 6.4900


get table as tab-delimited text file


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