AtGenExpress Visualization Tool (AVT)


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254595_at; then press "Run"

AtGenExpress
coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord

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Schmid, M., Davison, T.S., Henz, S.R., Pape, U.J., Demar, M., Vingron, M.,
Schölkopf, B., Weigel, D. and Lohmann, J.U. (2005). A gene expression
map of Arabidopsis thaliana development. Nat. Genet. 37, 501-6.

back to AtGenExpress main page Explanation to samples and expression values

developer: Christian K. Widmer

get table as tab-delimited text file


tissue cluster tissue genotype age sample Id stress time treatment expression value for 265418_at (at2g20880)
root roots Wt 7 days ATGE_3 not applicable not applicable not applicable 21.9498
root roots Wt 17 days ATGE_9 not applicable not applicable not applicable 14.5989
root root Wt 15 days ATGE_93 not applicable not applicable not applicable 13.5207
root root Wt 8 days ATGE_94 not applicable not applicable not applicable 13.2328
root root Wt 8 days ATGE_95 not applicable not applicable not applicable 15.0838
root root Wt 21 days ATGE_98 not applicable not applicable not applicable 13.7335
root root Wt 21 days ATGE_99 not applicable not applicable not applicable 13.2211
stem hypocotyl Wt 7 days ATGE_2 not applicable not applicable not applicable 12.3161
stem 1st node Wt 21+ days ATGE_28 not applicable not applicable not applicable 33.3907
stem stem, 2nd internode Wt 21+ days ATGE_27 not applicable not applicable not applicable 22.0411
leaf cotyledons Wt 7 days ATGE_1 not applicable not applicable not applicable 31.1327
leaf leaves 1 + 2 Wt 7 days ATGE_5 not applicable not applicable not applicable 15.6685
leaf rosette leaf #4, 1 cm long Wt 10 days ATGE_10 not applicable not applicable not applicable 16.7909
leaf rosette leaf #4, 1 cm long gl1-T 10 days ATGE_11 not applicable not applicable not applicable 18.9639
leaf rosette leaf # 2 Wt 17 days ATGE_12 not applicable not applicable not applicable 24.0772
leaf rosette leaf # 4 Wt 17 days ATGE_13 not applicable not applicable not applicable 15.4749
leaf rosette leaf # 6 Wt 17 days ATGE_14 not applicable not applicable not applicable 18.2997
leaf rosette leaf # 8 Wt 17 days ATGE_15 not applicable not applicable not applicable 14.4068
leaf rosette leaf # 10 Wt 17 days ATGE_16 not applicable not applicable not applicable 15.4542
leaf rosette leaf # 12 Wt 17 days ATGE_17 not applicable not applicable not applicable 15.2753
leaf rosette leaf # 12 gl1-T 17 days ATGE_18 not applicable not applicable not applicable 15.2472
leaf leaf 7, petiole Wt 17 days ATGE_19 not applicable not applicable not applicable 13.7061
leaf leaf 7, proximal half Wt 17 days ATGE_20 not applicable not applicable not applicable 15.3643
leaf leaf 7, distal half Wt 17 days ATGE_21 not applicable not applicable not applicable 18.5854
leaf leaf Wt 15 days ATGE_91 not applicable not applicable not applicable 15.9015
leaf senescing leaves Wt 35 days ATGE_25 not applicable not applicable not applicable 42.8683
leaf cauline leaves Wt 21+ days ATGE_26 not applicable not applicable not applicable 42.1996
whole plant seedling, green parts Wt 7 days ATGE_7 not applicable not applicable not applicable 19.9756
whole plant seedling, green parts Wt 8 days ATGE_96 not applicable not applicable not applicable 17.2324
whole plant seedling, green parts Wt 8 days ATGE_97 not applicable not applicable not applicable 13.5589
whole plant seedling, green parts Wt 21 days ATGE_100 not applicable not applicable not applicable 14.0590
whole plant seedling, green parts Wt 21 days ATGE_101 not applicable not applicable not applicable 13.9755
whole plant developmental drift, entire rosette after transition to flowering, but before bolting Wt 21 days ATGE_22 not applicable not applicable not applicable 17.0839
whole plant as above Wt 22 days ATGE_23 not applicable not applicable not applicable 14.9022
whole plant as above Wt 23 days ATGE_24 not applicable not applicable not applicable 15.4881
whole plant vegetative rosette Wt 7 days ATGE_87 not applicable not applicable not applicable 53.0621
whole plant vegetative rosette Wt 14 days ATGE_89 not applicable not applicable not applicable 19.2131
whole plant vegetative rosette Wt 21 days ATGE_90 not applicable not applicable not applicable 14.3122
apex shoot apex, vegetative + young leaves Wt 7 days ATGE_4 not applicable not applicable not applicable 12.0356
apex shoot apex, vegetative Wt 7 days ATGE_6 not applicable not applicable not applicable 13.1390
apex shoot apex, transition (before bolting) Wt 14 days ATGE_8 not applicable not applicable not applicable 14.3647
apex shoot apex, inflorescence (after bolting) Wt 21 days ATGE_29 not applicable not applicable not applicable 13.1386
apex shoot apex, inflorescence (after bolting) clv3-7 21+ days ATGE_46 not applicable not applicable not applicable 14.0453
apex shoot apex, inflorescence (after bolting) lfy-12 21+ days ATGE_47 not applicable not applicable not applicable 14.0204
apex shoot apex, inflorescence (after bolting) ap1-15 21+ days ATGE_48 not applicable not applicable not applicable 14.9299
apex shoot apex, inflorescence (after bolting) ap2-6 21+ days ATGE_49 not applicable not applicable not applicable 13.5780
apex shoot apex, inflorescence (after bolting) ufo-1 21+ days ATGE_52 not applicable not applicable not applicable 14.2537
apex shoot apex, inflorescence (after bolting) ap3-6 21+ days ATGE_50 not applicable not applicable not applicable 13.6319
apex shoot apex, inflorescence (after bolting) ag-12 21+ days ATGE_51 not applicable not applicable not applicable 14.4318
flowers flowers stage 9 Wt 21+ days ATGE_31 not applicable not applicable not applicable 14.0865
flowers flowers stage 10/11 Wt 21+ days ATGE_32 not applicable not applicable not applicable 17.8620
flowers flowers stage 12 Wt 21+ days ATGE_33 not applicable not applicable not applicable 25.2132
flowers flower stage 12; multi-carpel gynoeceum; enlarged meristem; increased organ number clv3-7 21+ days ATGE_53 not applicable not applicable not applicable 20.9910
flowers flower stage 12; shoot characteristics; most organs leaf-like lfy-12 21+ days ATGE_54 not applicable not applicable not applicable 14.1173
flowers flower stage 12; sepals replaced by leaf-like organs, petals mostly lacking, has secondary flowers ap1-15 21+ days ATGE_55 not applicable not applicable not applicable 13.2107
flowers flower stage 12; no sepals or petals ap2-6 21+ days ATGE_56 not applicable not applicable not applicable 12.5845
flowers flower stage 12; filamentous organs in whorls two and three ufo-1 21+ days ATGE_59 not applicable not applicable not applicable 18.7492
flowers flower stage 12; no petals or stamens ap3-6 21+ days ATGE_57 not applicable not applicable not applicable 21.7059
flowers flower stage 12; no stamens or carpels ag-12 21+ days ATGE_58 not applicable not applicable not applicable 21.5888
flowers flowers stage 15 Wt 21+ days ATGE_39 not applicable not applicable not applicable 34.3468
flowers flower Wt 28 days ATGE_92 not applicable not applicable not applicable 11.4715
floral organs flowers stage 15, pedicels Wt 21+ days ATGE_40 not applicable not applicable not applicable 16.5482
floral organs flowers stage 12, sepals Wt 21+ days ATGE_34 not applicable not applicable not applicable 266.0646
floral organs flowers stage 15, sepals Wt 21+ days ATGE_41 not applicable not applicable not applicable 368.9173
floral organs flowers stage 12, petals Wt 21+ days ATGE_35 not applicable not applicable not applicable 12.9650
floral organs flowers stage 15, petals Wt 21+ days ATGE_42 not applicable not applicable not applicable 15.6049
floral organs flowers stage 12, stamens Wt 21+ days ATGE_36 not applicable not applicable not applicable 15.5853
floral organs flowers stage 15, stamen Wt 21+ days ATGE_43 not applicable not applicable not applicable 16.5485
floral organs mature pollen Wt 6 wk ATGE_73 not applicable not applicable not applicable 19.6849
floral organs flowers stage 12, carpels Wt 21+ days ATGE_37 not applicable not applicable not applicable 13.5326
floral organs flowers stage 15, carpels Wt 21+ days ATGE_45 not applicable not applicable not applicable 14.4363
seeds siliques, w/ seeds stage 3; mid globular to early heart embryos Wt 8 wk ATGE_76 not applicable not applicable not applicable 21.1362
seeds siliques, w/ seeds stage 4; early to late heart embryos Wt 8 wk ATGE_77 not applicable not applicable not applicable 44.3298
seeds siliques, w/ seeds stage 5; late heart to mid torpedo embryos Wt 8 wk ATGE_78 not applicable not applicable not applicable 27.9627
seeds seeds, stage 6, w/o siliques; mid to late torpedo embryos Wt 8 wk ATGE_79 not applicable not applicable not applicable 28.8159
seeds seeds, stage 7, w/o siliques; late torpedo to early walking-stick embryos Wt 8 wk ATGE_81 not applicable not applicable not applicable 73.9465
seeds seeds, stage 8, w/o siliques; walking-stick to early curled cotyledons embryos Wt 8 wk ATGE_82 not applicable not applicable not applicable 20.1232
seeds seeds, stage 9, w/o siliques; curled cotyledons to early green cotyledons embryos Wt 8 wk ATGE_83 not applicable not applicable not applicable 87.8150
seeds seeds, stage 10, w/o siliques; green cotyledons embryos Wt 8 wk ATGE_84 not applicable not applicable not applicable 52.2242


get table as tab-delimited text file


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