AtGenExpress Visualization Tool (AVT)


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enter desired AGI or Affymetrix identifiers (comma
separated), e.g.:At5G61850, At5G57090, At1G29910,
254595_at; then press "Run"

AtGenExpress
coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord

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Schmid, M., Davison, T.S., Henz, S.R., Pape, U.J., Demar, M., Vingron, M.,
Schölkopf, B., Weigel, D. and Lohmann, J.U. (2005). A gene expression
map of Arabidopsis thaliana development. Nat. Genet. 37, 501-6.

back to AtGenExpress main page Explanation to samples and expression values

developer: Christian K. Widmer

get table as tab-delimited text file


tissue cluster tissue genotype age sample Id stress time treatment expression value for 263893_at (at2g21900)
root roots Wt 7 days ATGE_3 not applicable not applicable not applicable 10.0891
root roots Wt 17 days ATGE_9 not applicable not applicable not applicable 12.0904
root root Wt 15 days ATGE_93 not applicable not applicable not applicable 3.8461
root root Wt 8 days ATGE_94 not applicable not applicable not applicable 3.7545
root root Wt 8 days ATGE_95 not applicable not applicable not applicable 3.8622
root root Wt 21 days ATGE_98 not applicable not applicable not applicable 3.8051
root root Wt 21 days ATGE_99 not applicable not applicable not applicable 3.7664
stem hypocotyl Wt 7 days ATGE_2 not applicable not applicable not applicable 3.8184
stem 1st node Wt 21+ days ATGE_28 not applicable not applicable not applicable 3.9775
stem stem, 2nd internode Wt 21+ days ATGE_27 not applicable not applicable not applicable 4.1972
leaf cotyledons Wt 7 days ATGE_1 not applicable not applicable not applicable 4.2195
leaf leaves 1 + 2 Wt 7 days ATGE_5 not applicable not applicable not applicable 5.1039
leaf rosette leaf #4, 1 cm long Wt 10 days ATGE_10 not applicable not applicable not applicable 4.1531
leaf rosette leaf #4, 1 cm long gl1-T 10 days ATGE_11 not applicable not applicable not applicable 4.3358
leaf rosette leaf # 2 Wt 17 days ATGE_12 not applicable not applicable not applicable 4.1442
leaf rosette leaf # 4 Wt 17 days ATGE_13 not applicable not applicable not applicable 4.0406
leaf rosette leaf # 6 Wt 17 days ATGE_14 not applicable not applicable not applicable 4.8535
leaf rosette leaf # 8 Wt 17 days ATGE_15 not applicable not applicable not applicable 4.1566
leaf rosette leaf # 10 Wt 17 days ATGE_16 not applicable not applicable not applicable 4.2471
leaf rosette leaf # 12 Wt 17 days ATGE_17 not applicable not applicable not applicable 4.1316
leaf rosette leaf # 12 gl1-T 17 days ATGE_18 not applicable not applicable not applicable 4.1916
leaf leaf 7, petiole Wt 17 days ATGE_19 not applicable not applicable not applicable 4.0959
leaf leaf 7, proximal half Wt 17 days ATGE_20 not applicable not applicable not applicable 4.2171
leaf leaf 7, distal half Wt 17 days ATGE_21 not applicable not applicable not applicable 4.1141
leaf leaf Wt 15 days ATGE_91 not applicable not applicable not applicable 4.3420
leaf senescing leaves Wt 35 days ATGE_25 not applicable not applicable not applicable 4.1271
leaf cauline leaves Wt 21+ days ATGE_26 not applicable not applicable not applicable 4.2069
whole plant seedling, green parts Wt 7 days ATGE_7 not applicable not applicable not applicable 4.6182
whole plant seedling, green parts Wt 8 days ATGE_96 not applicable not applicable not applicable 4.1854
whole plant seedling, green parts Wt 8 days ATGE_97 not applicable not applicable not applicable 3.9400
whole plant seedling, green parts Wt 21 days ATGE_100 not applicable not applicable not applicable 3.9959
whole plant seedling, green parts Wt 21 days ATGE_101 not applicable not applicable not applicable 3.8914
whole plant developmental drift, entire rosette after transition to flowering, but before bolting Wt 21 days ATGE_22 not applicable not applicable not applicable 4.1348
whole plant as above Wt 22 days ATGE_23 not applicable not applicable not applicable 4.0347
whole plant as above Wt 23 days ATGE_24 not applicable not applicable not applicable 4.2503
whole plant vegetative rosette Wt 7 days ATGE_87 not applicable not applicable not applicable 4.2814
whole plant vegetative rosette Wt 14 days ATGE_89 not applicable not applicable not applicable 4.1463
whole plant vegetative rosette Wt 21 days ATGE_90 not applicable not applicable not applicable 4.1351
apex shoot apex, vegetative + young leaves Wt 7 days ATGE_4 not applicable not applicable not applicable 4.1107
apex shoot apex, vegetative Wt 7 days ATGE_6 not applicable not applicable not applicable 4.0779
apex shoot apex, transition (before bolting) Wt 14 days ATGE_8 not applicable not applicable not applicable 4.2443
apex shoot apex, inflorescence (after bolting) Wt 21 days ATGE_29 not applicable not applicable not applicable 4.3695
apex shoot apex, inflorescence (after bolting) clv3-7 21+ days ATGE_46 not applicable not applicable not applicable 4.6573
apex shoot apex, inflorescence (after bolting) lfy-12 21+ days ATGE_47 not applicable not applicable not applicable 4.0583
apex shoot apex, inflorescence (after bolting) ap1-15 21+ days ATGE_48 not applicable not applicable not applicable 4.1216
apex shoot apex, inflorescence (after bolting) ap2-6 21+ days ATGE_49 not applicable not applicable not applicable 4.2170
apex shoot apex, inflorescence (after bolting) ufo-1 21+ days ATGE_52 not applicable not applicable not applicable 4.1459
apex shoot apex, inflorescence (after bolting) ap3-6 21+ days ATGE_50 not applicable not applicable not applicable 4.2568
apex shoot apex, inflorescence (after bolting) ag-12 21+ days ATGE_51 not applicable not applicable not applicable 4.1820
flowers flowers stage 9 Wt 21+ days ATGE_31 not applicable not applicable not applicable 3.8958
flowers flowers stage 10/11 Wt 21+ days ATGE_32 not applicable not applicable not applicable 3.9478
flowers flowers stage 12 Wt 21+ days ATGE_33 not applicable not applicable not applicable 3.9406
flowers flower stage 12; multi-carpel gynoeceum; enlarged meristem; increased organ number clv3-7 21+ days ATGE_53 not applicable not applicable not applicable 3.8532
flowers flower stage 12; shoot characteristics; most organs leaf-like lfy-12 21+ days ATGE_54 not applicable not applicable not applicable 3.9212
flowers flower stage 12; sepals replaced by leaf-like organs, petals mostly lacking, has secondary flowers ap1-15 21+ days ATGE_55 not applicable not applicable not applicable 3.9759
flowers flower stage 12; no sepals or petals ap2-6 21+ days ATGE_56 not applicable not applicable not applicable 3.9441
flowers flower stage 12; filamentous organs in whorls two and three ufo-1 21+ days ATGE_59 not applicable not applicable not applicable 3.8074
flowers flower stage 12; no petals or stamens ap3-6 21+ days ATGE_57 not applicable not applicable not applicable 3.9031
flowers flower stage 12; no stamens or carpels ag-12 21+ days ATGE_58 not applicable not applicable not applicable 4.0519
flowers flowers stage 15 Wt 21+ days ATGE_39 not applicable not applicable not applicable 3.6549
flowers flower Wt 28 days ATGE_92 not applicable not applicable not applicable 3.6210
floral organs flowers stage 15, pedicels Wt 21+ days ATGE_40 not applicable not applicable not applicable 4.2462
floral organs flowers stage 12, sepals Wt 21+ days ATGE_34 not applicable not applicable not applicable 3.9514
floral organs flowers stage 15, sepals Wt 21+ days ATGE_41 not applicable not applicable not applicable 4.1891
floral organs flowers stage 12, petals Wt 21+ days ATGE_35 not applicable not applicable not applicable 3.9466
floral organs flowers stage 15, petals Wt 21+ days ATGE_42 not applicable not applicable not applicable 3.9517
floral organs flowers stage 12, stamens Wt 21+ days ATGE_36 not applicable not applicable not applicable 4.3481
floral organs flowers stage 15, stamen Wt 21+ days ATGE_43 not applicable not applicable not applicable 4.7370
floral organs mature pollen Wt 6 wk ATGE_73 not applicable not applicable not applicable 9.4970
floral organs flowers stage 12, carpels Wt 21+ days ATGE_37 not applicable not applicable not applicable 4.1385
floral organs flowers stage 15, carpels Wt 21+ days ATGE_45 not applicable not applicable not applicable 4.3094
seeds siliques, w/ seeds stage 3; mid globular to early heart embryos Wt 8 wk ATGE_76 not applicable not applicable not applicable 3.8248
seeds siliques, w/ seeds stage 4; early to late heart embryos Wt 8 wk ATGE_77 not applicable not applicable not applicable 3.7744
seeds siliques, w/ seeds stage 5; late heart to mid torpedo embryos Wt 8 wk ATGE_78 not applicable not applicable not applicable 4.0962
seeds seeds, stage 6, w/o siliques; mid to late torpedo embryos Wt 8 wk ATGE_79 not applicable not applicable not applicable 4.1506
seeds seeds, stage 7, w/o siliques; late torpedo to early walking-stick embryos Wt 8 wk ATGE_81 not applicable not applicable not applicable 4.3282
seeds seeds, stage 8, w/o siliques; walking-stick to early curled cotyledons embryos Wt 8 wk ATGE_82 not applicable not applicable not applicable 4.8647
seeds seeds, stage 9, w/o siliques; curled cotyledons to early green cotyledons embryos Wt 8 wk ATGE_83 not applicable not applicable not applicable 6.9439
seeds seeds, stage 10, w/o siliques; green cotyledons embryos Wt 8 wk ATGE_84 not applicable not applicable not applicable 7.3137


get table as tab-delimited text file


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