AtGenExpress Visualization Tool (AVT)


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enter desired AGI or Affymetrix identifiers (comma
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254595_at; then press "Run"

AtGenExpress
coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord

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Schmid, M., Davison, T.S., Henz, S.R., Pape, U.J., Demar, M., Vingron, M.,
Schölkopf, B., Weigel, D. and Lohmann, J.U. (2005). A gene expression
map of Arabidopsis thaliana development. Nat. Genet. 37, 501-6.

back to AtGenExpress main page Explanation to samples and expression values

developer: Christian K. Widmer

get table as tab-delimited text file


tissue cluster tissue genotype age sample Id stress time treatment expression value for 245051_at (at2g23320)
root roots Wt 7 days ATGE_3 not applicable not applicable not applicable 341.7171
root roots Wt 17 days ATGE_9 not applicable not applicable not applicable 315.9361
root root Wt 15 days ATGE_93 not applicable not applicable not applicable 320.9036
root root Wt 8 days ATGE_94 not applicable not applicable not applicable 405.3974
root root Wt 8 days ATGE_95 not applicable not applicable not applicable 281.0030
root root Wt 21 days ATGE_98 not applicable not applicable not applicable 497.8667
root root Wt 21 days ATGE_99 not applicable not applicable not applicable 327.9498
stem hypocotyl Wt 7 days ATGE_2 not applicable not applicable not applicable 371.8526
stem 1st node Wt 21+ days ATGE_28 not applicable not applicable not applicable 143.8476
stem stem, 2nd internode Wt 21+ days ATGE_27 not applicable not applicable not applicable 196.3185
leaf cotyledons Wt 7 days ATGE_1 not applicable not applicable not applicable 706.0948
leaf leaves 1 + 2 Wt 7 days ATGE_5 not applicable not applicable not applicable 558.1487
leaf rosette leaf #4, 1 cm long Wt 10 days ATGE_10 not applicable not applicable not applicable 170.5518
leaf rosette leaf #4, 1 cm long gl1-T 10 days ATGE_11 not applicable not applicable not applicable 464.9011
leaf rosette leaf # 2 Wt 17 days ATGE_12 not applicable not applicable not applicable 618.5700
leaf rosette leaf # 4 Wt 17 days ATGE_13 not applicable not applicable not applicable 707.0310
leaf rosette leaf # 6 Wt 17 days ATGE_14 not applicable not applicable not applicable 780.3686
leaf rosette leaf # 8 Wt 17 days ATGE_15 not applicable not applicable not applicable 705.3254
leaf rosette leaf # 10 Wt 17 days ATGE_16 not applicable not applicable not applicable 704.4436
leaf rosette leaf # 12 Wt 17 days ATGE_17 not applicable not applicable not applicable 605.1623
leaf rosette leaf # 12 gl1-T 17 days ATGE_18 not applicable not applicable not applicable 313.5964
leaf leaf 7, petiole Wt 17 days ATGE_19 not applicable not applicable not applicable 395.9388
leaf leaf 7, proximal half Wt 17 days ATGE_20 not applicable not applicable not applicable 775.6341
leaf leaf 7, distal half Wt 17 days ATGE_21 not applicable not applicable not applicable 968.1108
leaf leaf Wt 15 days ATGE_91 not applicable not applicable not applicable 315.3340
leaf senescing leaves Wt 35 days ATGE_25 not applicable not applicable not applicable 739.0362
leaf cauline leaves Wt 21+ days ATGE_26 not applicable not applicable not applicable 457.3204
whole plant seedling, green parts Wt 7 days ATGE_7 not applicable not applicable not applicable 126.0450
whole plant seedling, green parts Wt 8 days ATGE_96 not applicable not applicable not applicable 1987.3078
whole plant seedling, green parts Wt 8 days ATGE_97 not applicable not applicable not applicable 978.9473
whole plant seedling, green parts Wt 21 days ATGE_100 not applicable not applicable not applicable 1376.4132
whole plant seedling, green parts Wt 21 days ATGE_101 not applicable not applicable not applicable 1144.1471
whole plant developmental drift, entire rosette after transition to flowering, but before bolting Wt 21 days ATGE_22 not applicable not applicable not applicable 766.3783
whole plant as above Wt 22 days ATGE_23 not applicable not applicable not applicable 217.1188
whole plant as above Wt 23 days ATGE_24 not applicable not applicable not applicable 250.4185
whole plant vegetative rosette Wt 7 days ATGE_87 not applicable not applicable not applicable 199.8614
whole plant vegetative rosette Wt 14 days ATGE_89 not applicable not applicable not applicable 241.7156
whole plant vegetative rosette Wt 21 days ATGE_90 not applicable not applicable not applicable 222.9832
apex shoot apex, vegetative + young leaves Wt 7 days ATGE_4 not applicable not applicable not applicable 351.9472
apex shoot apex, vegetative Wt 7 days ATGE_6 not applicable not applicable not applicable 228.7032
apex shoot apex, transition (before bolting) Wt 14 days ATGE_8 not applicable not applicable not applicable 169.4617
apex shoot apex, inflorescence (after bolting) Wt 21 days ATGE_29 not applicable not applicable not applicable 265.6906
apex shoot apex, inflorescence (after bolting) clv3-7 21+ days ATGE_46 not applicable not applicable not applicable 313.1312
apex shoot apex, inflorescence (after bolting) lfy-12 21+ days ATGE_47 not applicable not applicable not applicable 201.3396
apex shoot apex, inflorescence (after bolting) ap1-15 21+ days ATGE_48 not applicable not applicable not applicable 275.7340
apex shoot apex, inflorescence (after bolting) ap2-6 21+ days ATGE_49 not applicable not applicable not applicable 235.1931
apex shoot apex, inflorescence (after bolting) ufo-1 21+ days ATGE_52 not applicable not applicable not applicable 192.8914
apex shoot apex, inflorescence (after bolting) ap3-6 21+ days ATGE_50 not applicable not applicable not applicable 156.4060
apex shoot apex, inflorescence (after bolting) ag-12 21+ days ATGE_51 not applicable not applicable not applicable 123.7693
flowers flowers stage 9 Wt 21+ days ATGE_31 not applicable not applicable not applicable 199.3754
flowers flowers stage 10/11 Wt 21+ days ATGE_32 not applicable not applicable not applicable 160.0919
flowers flowers stage 12 Wt 21+ days ATGE_33 not applicable not applicable not applicable 172.7552
flowers flower stage 12; multi-carpel gynoeceum; enlarged meristem; increased organ number clv3-7 21+ days ATGE_53 not applicable not applicable not applicable 216.1791
flowers flower stage 12; shoot characteristics; most organs leaf-like lfy-12 21+ days ATGE_54 not applicable not applicable not applicable 259.2583
flowers flower stage 12; sepals replaced by leaf-like organs, petals mostly lacking, has secondary flowers ap1-15 21+ days ATGE_55 not applicable not applicable not applicable 183.0682
flowers flower stage 12; no sepals or petals ap2-6 21+ days ATGE_56 not applicable not applicable not applicable 147.3218
flowers flower stage 12; filamentous organs in whorls two and three ufo-1 21+ days ATGE_59 not applicable not applicable not applicable 294.3521
flowers flower stage 12; no petals or stamens ap3-6 21+ days ATGE_57 not applicable not applicable not applicable 193.2461
flowers flower stage 12; no stamens or carpels ag-12 21+ days ATGE_58 not applicable not applicable not applicable 187.2404
flowers flowers stage 15 Wt 21+ days ATGE_39 not applicable not applicable not applicable 460.8334
flowers flower Wt 28 days ATGE_92 not applicable not applicable not applicable 93.0357
floral organs flowers stage 15, pedicels Wt 21+ days ATGE_40 not applicable not applicable not applicable 147.0947
floral organs flowers stage 12, sepals Wt 21+ days ATGE_34 not applicable not applicable not applicable 578.6056
floral organs flowers stage 15, sepals Wt 21+ days ATGE_41 not applicable not applicable not applicable 1188.4525
floral organs flowers stage 12, petals Wt 21+ days ATGE_35 not applicable not applicable not applicable 74.8322
floral organs flowers stage 15, petals Wt 21+ days ATGE_42 not applicable not applicable not applicable 674.1697
floral organs flowers stage 12, stamens Wt 21+ days ATGE_36 not applicable not applicable not applicable 92.8527
floral organs flowers stage 15, stamen Wt 21+ days ATGE_43 not applicable not applicable not applicable 256.3490
floral organs mature pollen Wt 6 wk ATGE_73 not applicable not applicable not applicable 811.1587
floral organs flowers stage 12, carpels Wt 21+ days ATGE_37 not applicable not applicable not applicable 234.3985
floral organs flowers stage 15, carpels Wt 21+ days ATGE_45 not applicable not applicable not applicable 201.1718
seeds siliques, w/ seeds stage 3; mid globular to early heart embryos Wt 8 wk ATGE_76 not applicable not applicable not applicable 142.9965
seeds siliques, w/ seeds stage 4; early to late heart embryos Wt 8 wk ATGE_77 not applicable not applicable not applicable 144.9669
seeds siliques, w/ seeds stage 5; late heart to mid torpedo embryos Wt 8 wk ATGE_78 not applicable not applicable not applicable 122.5365
seeds seeds, stage 6, w/o siliques; mid to late torpedo embryos Wt 8 wk ATGE_79 not applicable not applicable not applicable 210.2459
seeds seeds, stage 7, w/o siliques; late torpedo to early walking-stick embryos Wt 8 wk ATGE_81 not applicable not applicable not applicable 218.0418
seeds seeds, stage 8, w/o siliques; walking-stick to early curled cotyledons embryos Wt 8 wk ATGE_82 not applicable not applicable not applicable 626.4902
seeds seeds, stage 9, w/o siliques; curled cotyledons to early green cotyledons embryos Wt 8 wk ATGE_83 not applicable not applicable not applicable 695.3494
seeds seeds, stage 10, w/o siliques; green cotyledons embryos Wt 8 wk ATGE_84 not applicable not applicable not applicable 848.8517


get table as tab-delimited text file


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