AtGenExpress Visualization Tool (AVT)


Select experiment
Select normalization        only create tab-delimited file
Select genes
enter desired AGI or Affymetrix identifiers (comma
separated), e.g.:At5G61850, At5G57090, At1G29910,
254595_at; then press "Run"

AtGenExpress
coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord

Mouse over for sample and expression information.
plot
Schmid, M., Davison, T.S., Henz, S.R., Pape, U.J., Demar, M., Vingron, M.,
Schölkopf, B., Weigel, D. and Lohmann, J.U. (2005). A gene expression
map of Arabidopsis thaliana development. Nat. Genet. 37, 501-6.

back to AtGenExpress main page Explanation to samples and expression values

developer: Christian K. Widmer

get table as tab-delimited text file


tissue cluster tissue genotype age sample Id stress time treatment expression value for 263886_at (at2g36960)
root roots Wt 7 days ATGE_3 not applicable not applicable not applicable 91.4514
root roots Wt 17 days ATGE_9 not applicable not applicable not applicable 98.7535
root root Wt 15 days ATGE_93 not applicable not applicable not applicable 112.0408
root root Wt 8 days ATGE_94 not applicable not applicable not applicable 131.4263
root root Wt 8 days ATGE_95 not applicable not applicable not applicable 123.3689
root root Wt 21 days ATGE_98 not applicable not applicable not applicable 132.1426
root root Wt 21 days ATGE_99 not applicable not applicable not applicable 128.9679
stem hypocotyl Wt 7 days ATGE_2 not applicable not applicable not applicable 77.6149
stem 1st node Wt 21+ days ATGE_28 not applicable not applicable not applicable 100.1580
stem stem, 2nd internode Wt 21+ days ATGE_27 not applicable not applicable not applicable 119.8021
leaf cotyledons Wt 7 days ATGE_1 not applicable not applicable not applicable 75.8061
leaf leaves 1 + 2 Wt 7 days ATGE_5 not applicable not applicable not applicable 90.9110
leaf rosette leaf #4, 1 cm long Wt 10 days ATGE_10 not applicable not applicable not applicable 82.8024
leaf rosette leaf #4, 1 cm long gl1-T 10 days ATGE_11 not applicable not applicable not applicable 82.8038
leaf rosette leaf # 2 Wt 17 days ATGE_12 not applicable not applicable not applicable 93.6594
leaf rosette leaf # 4 Wt 17 days ATGE_13 not applicable not applicable not applicable 82.6946
leaf rosette leaf # 6 Wt 17 days ATGE_14 not applicable not applicable not applicable 72.8130
leaf rosette leaf # 8 Wt 17 days ATGE_15 not applicable not applicable not applicable 80.4348
leaf rosette leaf # 10 Wt 17 days ATGE_16 not applicable not applicable not applicable 85.3568
leaf rosette leaf # 12 Wt 17 days ATGE_17 not applicable not applicable not applicable 80.9236
leaf rosette leaf # 12 gl1-T 17 days ATGE_18 not applicable not applicable not applicable 114.9568
leaf leaf 7, petiole Wt 17 days ATGE_19 not applicable not applicable not applicable 79.4538
leaf leaf 7, proximal half Wt 17 days ATGE_20 not applicable not applicable not applicable 75.3517
leaf leaf 7, distal half Wt 17 days ATGE_21 not applicable not applicable not applicable 87.1942
leaf leaf Wt 15 days ATGE_91 not applicable not applicable not applicable 109.1500
leaf senescing leaves Wt 35 days ATGE_25 not applicable not applicable not applicable 207.5199
leaf cauline leaves Wt 21+ days ATGE_26 not applicable not applicable not applicable 127.6738
whole plant seedling, green parts Wt 7 days ATGE_7 not applicable not applicable not applicable 115.1860
whole plant seedling, green parts Wt 8 days ATGE_96 not applicable not applicable not applicable 120.9219
whole plant seedling, green parts Wt 8 days ATGE_97 not applicable not applicable not applicable 78.7907
whole plant seedling, green parts Wt 21 days ATGE_100 not applicable not applicable not applicable 97.3354
whole plant seedling, green parts Wt 21 days ATGE_101 not applicable not applicable not applicable 96.4937
whole plant developmental drift, entire rosette after transition to flowering, but before bolting Wt 21 days ATGE_22 not applicable not applicable not applicable 88.9456
whole plant as above Wt 22 days ATGE_23 not applicable not applicable not applicable 72.0422
whole plant as above Wt 23 days ATGE_24 not applicable not applicable not applicable 87.0594
whole plant vegetative rosette Wt 7 days ATGE_87 not applicable not applicable not applicable 109.6514
whole plant vegetative rosette Wt 14 days ATGE_89 not applicable not applicable not applicable 129.4048
whole plant vegetative rosette Wt 21 days ATGE_90 not applicable not applicable not applicable 103.8735
apex shoot apex, vegetative + young leaves Wt 7 days ATGE_4 not applicable not applicable not applicable 99.8560
apex shoot apex, vegetative Wt 7 days ATGE_6 not applicable not applicable not applicable 100.6774
apex shoot apex, transition (before bolting) Wt 14 days ATGE_8 not applicable not applicable not applicable 127.6423
apex shoot apex, inflorescence (after bolting) Wt 21 days ATGE_29 not applicable not applicable not applicable 145.2074
apex shoot apex, inflorescence (after bolting) clv3-7 21+ days ATGE_46 not applicable not applicable not applicable 131.2007
apex shoot apex, inflorescence (after bolting) lfy-12 21+ days ATGE_47 not applicable not applicable not applicable 128.4373
apex shoot apex, inflorescence (after bolting) ap1-15 21+ days ATGE_48 not applicable not applicable not applicable 136.6277
apex shoot apex, inflorescence (after bolting) ap2-6 21+ days ATGE_49 not applicable not applicable not applicable 149.3510
apex shoot apex, inflorescence (after bolting) ufo-1 21+ days ATGE_52 not applicable not applicable not applicable 127.4093
apex shoot apex, inflorescence (after bolting) ap3-6 21+ days ATGE_50 not applicable not applicable not applicable 143.6439
apex shoot apex, inflorescence (after bolting) ag-12 21+ days ATGE_51 not applicable not applicable not applicable 122.6487
flowers flowers stage 9 Wt 21+ days ATGE_31 not applicable not applicable not applicable 133.6599
flowers flowers stage 10/11 Wt 21+ days ATGE_32 not applicable not applicable not applicable 108.7747
flowers flowers stage 12 Wt 21+ days ATGE_33 not applicable not applicable not applicable 105.5411
flowers flower stage 12; multi-carpel gynoeceum; enlarged meristem; increased organ number clv3-7 21+ days ATGE_53 not applicable not applicable not applicable 98.6501
flowers flower stage 12; shoot characteristics; most organs leaf-like lfy-12 21+ days ATGE_54 not applicable not applicable not applicable 114.9250
flowers flower stage 12; sepals replaced by leaf-like organs, petals mostly lacking, has secondary flowers ap1-15 21+ days ATGE_55 not applicable not applicable not applicable 108.3546
flowers flower stage 12; no sepals or petals ap2-6 21+ days ATGE_56 not applicable not applicable not applicable 132.9001
flowers flower stage 12; filamentous organs in whorls two and three ufo-1 21+ days ATGE_59 not applicable not applicable not applicable 113.4132
flowers flower stage 12; no petals or stamens ap3-6 21+ days ATGE_57 not applicable not applicable not applicable 132.9977
flowers flower stage 12; no stamens or carpels ag-12 21+ days ATGE_58 not applicable not applicable not applicable 113.7724
flowers flowers stage 15 Wt 21+ days ATGE_39 not applicable not applicable not applicable 107.7295
flowers flower Wt 28 days ATGE_92 not applicable not applicable not applicable 104.8573
floral organs flowers stage 15, pedicels Wt 21+ days ATGE_40 not applicable not applicable not applicable 90.1467
floral organs flowers stage 12, sepals Wt 21+ days ATGE_34 not applicable not applicable not applicable 96.7554
floral organs flowers stage 15, sepals Wt 21+ days ATGE_41 not applicable not applicable not applicable 169.8672
floral organs flowers stage 12, petals Wt 21+ days ATGE_35 not applicable not applicable not applicable 112.7114
floral organs flowers stage 15, petals Wt 21+ days ATGE_42 not applicable not applicable not applicable 152.3346
floral organs flowers stage 12, stamens Wt 21+ days ATGE_36 not applicable not applicable not applicable 135.5658
floral organs flowers stage 15, stamen Wt 21+ days ATGE_43 not applicable not applicable not applicable 146.7814
floral organs mature pollen Wt 6 wk ATGE_73 not applicable not applicable not applicable 311.9491
floral organs flowers stage 12, carpels Wt 21+ days ATGE_37 not applicable not applicable not applicable 152.7742
floral organs flowers stage 15, carpels Wt 21+ days ATGE_45 not applicable not applicable not applicable 118.4443
seeds siliques, w/ seeds stage 3; mid globular to early heart embryos Wt 8 wk ATGE_76 not applicable not applicable not applicable 86.0243
seeds siliques, w/ seeds stage 4; early to late heart embryos Wt 8 wk ATGE_77 not applicable not applicable not applicable 133.5455
seeds siliques, w/ seeds stage 5; late heart to mid torpedo embryos Wt 8 wk ATGE_78 not applicable not applicable not applicable 144.6180
seeds seeds, stage 6, w/o siliques; mid to late torpedo embryos Wt 8 wk ATGE_79 not applicable not applicable not applicable 248.5894
seeds seeds, stage 7, w/o siliques; late torpedo to early walking-stick embryos Wt 8 wk ATGE_81 not applicable not applicable not applicable 301.3207
seeds seeds, stage 8, w/o siliques; walking-stick to early curled cotyledons embryos Wt 8 wk ATGE_82 not applicable not applicable not applicable 530.3491
seeds seeds, stage 9, w/o siliques; curled cotyledons to early green cotyledons embryos Wt 8 wk ATGE_83 not applicable not applicable not applicable 591.6097
seeds seeds, stage 10, w/o siliques; green cotyledons embryos Wt 8 wk ATGE_84 not applicable not applicable not applicable 562.0729


get table as tab-delimited text file


weigelworld.org | Datenschutzerklärung | Impressum