AtGenExpress Visualization Tool (AVT)


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254595_at; then press "Run"

AtGenExpress
coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord

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Schmid, M., Davison, T.S., Henz, S.R., Pape, U.J., Demar, M., Vingron, M.,
Schölkopf, B., Weigel, D. and Lohmann, J.U. (2005). A gene expression
map of Arabidopsis thaliana development. Nat. Genet. 37, 501-6.

back to AtGenExpress main page Explanation to samples and expression values

developer: Christian K. Widmer

get table as tab-delimited text file


tissue cluster tissue genotype age sample Id stress time treatment expression value for 260528_at (at2g47260)
root roots Wt 7 days ATGE_3 not applicable not applicable not applicable 219.0085
root roots Wt 17 days ATGE_9 not applicable not applicable not applicable 193.2936
root root Wt 15 days ATGE_93 not applicable not applicable not applicable 118.4902
root root Wt 8 days ATGE_94 not applicable not applicable not applicable 57.1642
root root Wt 8 days ATGE_95 not applicable not applicable not applicable 62.8894
root root Wt 21 days ATGE_98 not applicable not applicable not applicable 148.3570
root root Wt 21 days ATGE_99 not applicable not applicable not applicable 163.9249
stem hypocotyl Wt 7 days ATGE_2 not applicable not applicable not applicable 62.8151
stem 1st node Wt 21+ days ATGE_28 not applicable not applicable not applicable 42.7950
stem stem, 2nd internode Wt 21+ days ATGE_27 not applicable not applicable not applicable 29.9201
leaf cotyledons Wt 7 days ATGE_1 not applicable not applicable not applicable 18.8624
leaf leaves 1 + 2 Wt 7 days ATGE_5 not applicable not applicable not applicable 27.3395
leaf rosette leaf #4, 1 cm long Wt 10 days ATGE_10 not applicable not applicable not applicable 61.8966
leaf rosette leaf #4, 1 cm long gl1-T 10 days ATGE_11 not applicable not applicable not applicable 69.6107
leaf rosette leaf # 2 Wt 17 days ATGE_12 not applicable not applicable not applicable 16.6380
leaf rosette leaf # 4 Wt 17 days ATGE_13 not applicable not applicable not applicable 25.7526
leaf rosette leaf # 6 Wt 17 days ATGE_14 not applicable not applicable not applicable 23.5072
leaf rosette leaf # 8 Wt 17 days ATGE_15 not applicable not applicable not applicable 37.7184
leaf rosette leaf # 10 Wt 17 days ATGE_16 not applicable not applicable not applicable 53.0840
leaf rosette leaf # 12 Wt 17 days ATGE_17 not applicable not applicable not applicable 66.3123
leaf rosette leaf # 12 gl1-T 17 days ATGE_18 not applicable not applicable not applicable 85.4254
leaf leaf 7, petiole Wt 17 days ATGE_19 not applicable not applicable not applicable 36.3510
leaf leaf 7, proximal half Wt 17 days ATGE_20 not applicable not applicable not applicable 37.3531
leaf leaf 7, distal half Wt 17 days ATGE_21 not applicable not applicable not applicable 26.9043
leaf leaf Wt 15 days ATGE_91 not applicable not applicable not applicable 43.1681
leaf senescing leaves Wt 35 days ATGE_25 not applicable not applicable not applicable 23.3587
leaf cauline leaves Wt 21+ days ATGE_26 not applicable not applicable not applicable 38.5496
whole plant seedling, green parts Wt 7 days ATGE_7 not applicable not applicable not applicable 42.5184
whole plant seedling, green parts Wt 8 days ATGE_96 not applicable not applicable not applicable 19.4836
whole plant seedling, green parts Wt 8 days ATGE_97 not applicable not applicable not applicable 20.5415
whole plant seedling, green parts Wt 21 days ATGE_100 not applicable not applicable not applicable 28.7706
whole plant seedling, green parts Wt 21 days ATGE_101 not applicable not applicable not applicable 35.3699
whole plant developmental drift, entire rosette after transition to flowering, but before bolting Wt 21 days ATGE_22 not applicable not applicable not applicable 34.8098
whole plant as above Wt 22 days ATGE_23 not applicable not applicable not applicable 41.6368
whole plant as above Wt 23 days ATGE_24 not applicable not applicable not applicable 31.2694
whole plant vegetative rosette Wt 7 days ATGE_87 not applicable not applicable not applicable 25.5316
whole plant vegetative rosette Wt 14 days ATGE_89 not applicable not applicable not applicable 55.6680
whole plant vegetative rosette Wt 21 days ATGE_90 not applicable not applicable not applicable 67.6799
apex shoot apex, vegetative + young leaves Wt 7 days ATGE_4 not applicable not applicable not applicable 46.3861
apex shoot apex, vegetative Wt 7 days ATGE_6 not applicable not applicable not applicable 44.2646
apex shoot apex, transition (before bolting) Wt 14 days ATGE_8 not applicable not applicable not applicable 40.1663
apex shoot apex, inflorescence (after bolting) Wt 21 days ATGE_29 not applicable not applicable not applicable 60.4303
apex shoot apex, inflorescence (after bolting) clv3-7 21+ days ATGE_46 not applicable not applicable not applicable 47.7522
apex shoot apex, inflorescence (after bolting) lfy-12 21+ days ATGE_47 not applicable not applicable not applicable 29.6030
apex shoot apex, inflorescence (after bolting) ap1-15 21+ days ATGE_48 not applicable not applicable not applicable 48.7897
apex shoot apex, inflorescence (after bolting) ap2-6 21+ days ATGE_49 not applicable not applicable not applicable 41.3017
apex shoot apex, inflorescence (after bolting) ufo-1 21+ days ATGE_52 not applicable not applicable not applicable 30.9116
apex shoot apex, inflorescence (after bolting) ap3-6 21+ days ATGE_50 not applicable not applicable not applicable 33.6195
apex shoot apex, inflorescence (after bolting) ag-12 21+ days ATGE_51 not applicable not applicable not applicable 47.3457
flowers flowers stage 9 Wt 21+ days ATGE_31 not applicable not applicable not applicable 87.3960
flowers flowers stage 10/11 Wt 21+ days ATGE_32 not applicable not applicable not applicable 80.0398
flowers flowers stage 12 Wt 21+ days ATGE_33 not applicable not applicable not applicable 68.8335
flowers flower stage 12; multi-carpel gynoeceum; enlarged meristem; increased organ number clv3-7 21+ days ATGE_53 not applicable not applicable not applicable 51.4776
flowers flower stage 12; shoot characteristics; most organs leaf-like lfy-12 21+ days ATGE_54 not applicable not applicable not applicable 78.7532
flowers flower stage 12; sepals replaced by leaf-like organs, petals mostly lacking, has secondary flowers ap1-15 21+ days ATGE_55 not applicable not applicable not applicable 73.3650
flowers flower stage 12; no sepals or petals ap2-6 21+ days ATGE_56 not applicable not applicable not applicable 48.7419
flowers flower stage 12; filamentous organs in whorls two and three ufo-1 21+ days ATGE_59 not applicable not applicable not applicable 132.3704
flowers flower stage 12; no petals or stamens ap3-6 21+ days ATGE_57 not applicable not applicable not applicable 136.7450
flowers flower stage 12; no stamens or carpels ag-12 21+ days ATGE_58 not applicable not applicable not applicable 63.0267
flowers flowers stage 15 Wt 21+ days ATGE_39 not applicable not applicable not applicable 76.1094
flowers flower Wt 28 days ATGE_92 not applicable not applicable not applicable 49.4639
floral organs flowers stage 15, pedicels Wt 21+ days ATGE_40 not applicable not applicable not applicable 43.6323
floral organs flowers stage 12, sepals Wt 21+ days ATGE_34 not applicable not applicable not applicable 68.1019
floral organs flowers stage 15, sepals Wt 21+ days ATGE_41 not applicable not applicable not applicable 39.2494
floral organs flowers stage 12, petals Wt 21+ days ATGE_35 not applicable not applicable not applicable 17.6934
floral organs flowers stage 15, petals Wt 21+ days ATGE_42 not applicable not applicable not applicable 22.2112
floral organs flowers stage 12, stamens Wt 21+ days ATGE_36 not applicable not applicable not applicable 25.4931
floral organs flowers stage 15, stamen Wt 21+ days ATGE_43 not applicable not applicable not applicable 23.6932
floral organs mature pollen Wt 6 wk ATGE_73 not applicable not applicable not applicable 51.6055
floral organs flowers stage 12, carpels Wt 21+ days ATGE_37 not applicable not applicable not applicable 112.0363
floral organs flowers stage 15, carpels Wt 21+ days ATGE_45 not applicable not applicable not applicable 130.9376
seeds siliques, w/ seeds stage 3; mid globular to early heart embryos Wt 8 wk ATGE_76 not applicable not applicable not applicable 39.2869
seeds siliques, w/ seeds stage 4; early to late heart embryos Wt 8 wk ATGE_77 not applicable not applicable not applicable 28.9841
seeds siliques, w/ seeds stage 5; late heart to mid torpedo embryos Wt 8 wk ATGE_78 not applicable not applicable not applicable 24.1492
seeds seeds, stage 6, w/o siliques; mid to late torpedo embryos Wt 8 wk ATGE_79 not applicable not applicable not applicable 45.9746
seeds seeds, stage 7, w/o siliques; late torpedo to early walking-stick embryos Wt 8 wk ATGE_81 not applicable not applicable not applicable 47.5374
seeds seeds, stage 8, w/o siliques; walking-stick to early curled cotyledons embryos Wt 8 wk ATGE_82 not applicable not applicable not applicable 104.1513
seeds seeds, stage 9, w/o siliques; curled cotyledons to early green cotyledons embryos Wt 8 wk ATGE_83 not applicable not applicable not applicable 147.0611
seeds seeds, stage 10, w/o siliques; green cotyledons embryos Wt 8 wk ATGE_84 not applicable not applicable not applicable 114.2843


get table as tab-delimited text file


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