AtGenExpress Visualization Tool (AVT)


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enter desired AGI or Affymetrix identifiers (comma
separated), e.g.:At5G61850, At5G57090, At1G29910,
254595_at; then press "Run"

AtGenExpress
coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord

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Schmid, M., Davison, T.S., Henz, S.R., Pape, U.J., Demar, M., Vingron, M.,
Schölkopf, B., Weigel, D. and Lohmann, J.U. (2005). A gene expression
map of Arabidopsis thaliana development. Nat. Genet. 37, 501-6.

back to AtGenExpress main page Explanation to samples and expression values

developer: Christian K. Widmer

get table as tab-delimited text file


tissue cluster tissue genotype age sample Id stress time treatment expression value for 251592_at (at3g57670)
root roots Wt 7 days ATGE_3 not applicable not applicable not applicable 11.0444
root roots Wt 17 days ATGE_9 not applicable not applicable not applicable 18.7129
root root Wt 15 days ATGE_93 not applicable not applicable not applicable 11.0714
root root Wt 8 days ATGE_94 not applicable not applicable not applicable 11.0537
root root Wt 8 days ATGE_95 not applicable not applicable not applicable 11.8134
root root Wt 21 days ATGE_98 not applicable not applicable not applicable 15.8099
root root Wt 21 days ATGE_99 not applicable not applicable not applicable 13.1846
stem hypocotyl Wt 7 days ATGE_2 not applicable not applicable not applicable 28.0183
stem 1st node Wt 21+ days ATGE_28 not applicable not applicable not applicable 36.4336
stem stem, 2nd internode Wt 21+ days ATGE_27 not applicable not applicable not applicable 16.7462
leaf cotyledons Wt 7 days ATGE_1 not applicable not applicable not applicable 10.1875
leaf leaves 1 + 2 Wt 7 days ATGE_5 not applicable not applicable not applicable 10.8717
leaf rosette leaf #4, 1 cm long Wt 10 days ATGE_10 not applicable not applicable not applicable 13.8240
leaf rosette leaf #4, 1 cm long gl1-T 10 days ATGE_11 not applicable not applicable not applicable 8.4165
leaf rosette leaf # 2 Wt 17 days ATGE_12 not applicable not applicable not applicable 8.5456
leaf rosette leaf # 4 Wt 17 days ATGE_13 not applicable not applicable not applicable 10.3141
leaf rosette leaf # 6 Wt 17 days ATGE_14 not applicable not applicable not applicable 9.9147
leaf rosette leaf # 8 Wt 17 days ATGE_15 not applicable not applicable not applicable 10.7464
leaf rosette leaf # 10 Wt 17 days ATGE_16 not applicable not applicable not applicable 9.1967
leaf rosette leaf # 12 Wt 17 days ATGE_17 not applicable not applicable not applicable 12.6141
leaf rosette leaf # 12 gl1-T 17 days ATGE_18 not applicable not applicable not applicable 12.0600
leaf leaf 7, petiole Wt 17 days ATGE_19 not applicable not applicable not applicable 12.1264
leaf leaf 7, proximal half Wt 17 days ATGE_20 not applicable not applicable not applicable 13.4330
leaf leaf 7, distal half Wt 17 days ATGE_21 not applicable not applicable not applicable 9.9870
leaf leaf Wt 15 days ATGE_91 not applicable not applicable not applicable 10.5691
leaf senescing leaves Wt 35 days ATGE_25 not applicable not applicable not applicable 9.1307
leaf cauline leaves Wt 21+ days ATGE_26 not applicable not applicable not applicable 9.6004
whole plant seedling, green parts Wt 7 days ATGE_7 not applicable not applicable not applicable 11.4736
whole plant seedling, green parts Wt 8 days ATGE_96 not applicable not applicable not applicable 13.5573
whole plant seedling, green parts Wt 8 days ATGE_97 not applicable not applicable not applicable 14.5339
whole plant seedling, green parts Wt 21 days ATGE_100 not applicable not applicable not applicable 13.9351
whole plant seedling, green parts Wt 21 days ATGE_101 not applicable not applicable not applicable 13.2617
whole plant developmental drift, entire rosette after transition to flowering, but before bolting Wt 21 days ATGE_22 not applicable not applicable not applicable 12.2395
whole plant as above Wt 22 days ATGE_23 not applicable not applicable not applicable 8.9174
whole plant as above Wt 23 days ATGE_24 not applicable not applicable not applicable 9.3029
whole plant vegetative rosette Wt 7 days ATGE_87 not applicable not applicable not applicable 9.4738
whole plant vegetative rosette Wt 14 days ATGE_89 not applicable not applicable not applicable 8.7551
whole plant vegetative rosette Wt 21 days ATGE_90 not applicable not applicable not applicable 8.1920
apex shoot apex, vegetative + young leaves Wt 7 days ATGE_4 not applicable not applicable not applicable 11.8222
apex shoot apex, vegetative Wt 7 days ATGE_6 not applicable not applicable not applicable 18.8173
apex shoot apex, transition (before bolting) Wt 14 days ATGE_8 not applicable not applicable not applicable 29.4690
apex shoot apex, inflorescence (after bolting) Wt 21 days ATGE_29 not applicable not applicable not applicable 31.3158
apex shoot apex, inflorescence (after bolting) clv3-7 21+ days ATGE_46 not applicable not applicable not applicable 37.0056
apex shoot apex, inflorescence (after bolting) lfy-12 21+ days ATGE_47 not applicable not applicable not applicable 23.6001
apex shoot apex, inflorescence (after bolting) ap1-15 21+ days ATGE_48 not applicable not applicable not applicable 18.3500
apex shoot apex, inflorescence (after bolting) ap2-6 21+ days ATGE_49 not applicable not applicable not applicable 22.2634
apex shoot apex, inflorescence (after bolting) ufo-1 21+ days ATGE_52 not applicable not applicable not applicable 27.8096
apex shoot apex, inflorescence (after bolting) ap3-6 21+ days ATGE_50 not applicable not applicable not applicable 38.3362
apex shoot apex, inflorescence (after bolting) ag-12 21+ days ATGE_51 not applicable not applicable not applicable 33.2859
flowers flowers stage 9 Wt 21+ days ATGE_31 not applicable not applicable not applicable 42.0039
flowers flowers stage 10/11 Wt 21+ days ATGE_32 not applicable not applicable not applicable 54.8867
flowers flowers stage 12 Wt 21+ days ATGE_33 not applicable not applicable not applicable 77.2582
flowers flower stage 12; multi-carpel gynoeceum; enlarged meristem; increased organ number clv3-7 21+ days ATGE_53 not applicable not applicable not applicable 75.7538
flowers flower stage 12; shoot characteristics; most organs leaf-like lfy-12 21+ days ATGE_54 not applicable not applicable not applicable 37.1793
flowers flower stage 12; sepals replaced by leaf-like organs, petals mostly lacking, has secondary flowers ap1-15 21+ days ATGE_55 not applicable not applicable not applicable 70.9600
flowers flower stage 12; no sepals or petals ap2-6 21+ days ATGE_56 not applicable not applicable not applicable 109.7786
flowers flower stage 12; filamentous organs in whorls two and three ufo-1 21+ days ATGE_59 not applicable not applicable not applicable 116.3706
flowers flower stage 12; no petals or stamens ap3-6 21+ days ATGE_57 not applicable not applicable not applicable 171.5610
flowers flower stage 12; no stamens or carpels ag-12 21+ days ATGE_58 not applicable not applicable not applicable 49.8346
flowers flowers stage 15 Wt 21+ days ATGE_39 not applicable not applicable not applicable 53.5641
flowers flower Wt 28 days ATGE_92 not applicable not applicable not applicable 51.4735
floral organs flowers stage 15, pedicels Wt 21+ days ATGE_40 not applicable not applicable not applicable 12.2637
floral organs flowers stage 12, sepals Wt 21+ days ATGE_34 not applicable not applicable not applicable 12.0879
floral organs flowers stage 15, sepals Wt 21+ days ATGE_41 not applicable not applicable not applicable 10.6133
floral organs flowers stage 12, petals Wt 21+ days ATGE_35 not applicable not applicable not applicable 16.3090
floral organs flowers stage 15, petals Wt 21+ days ATGE_42 not applicable not applicable not applicable 25.1396
floral organs flowers stage 12, stamens Wt 21+ days ATGE_36 not applicable not applicable not applicable 8.8652
floral organs flowers stage 15, stamen Wt 21+ days ATGE_43 not applicable not applicable not applicable 16.3267
floral organs mature pollen Wt 6 wk ATGE_73 not applicable not applicable not applicable 27.5783
floral organs flowers stage 12, carpels Wt 21+ days ATGE_37 not applicable not applicable not applicable 162.6232
floral organs flowers stage 15, carpels Wt 21+ days ATGE_45 not applicable not applicable not applicable 88.4590
seeds siliques, w/ seeds stage 3; mid globular to early heart embryos Wt 8 wk ATGE_76 not applicable not applicable not applicable 25.3396
seeds siliques, w/ seeds stage 4; early to late heart embryos Wt 8 wk ATGE_77 not applicable not applicable not applicable 13.8806
seeds siliques, w/ seeds stage 5; late heart to mid torpedo embryos Wt 8 wk ATGE_78 not applicable not applicable not applicable 12.6040
seeds seeds, stage 6, w/o siliques; mid to late torpedo embryos Wt 8 wk ATGE_79 not applicable not applicable not applicable 13.3690
seeds seeds, stage 7, w/o siliques; late torpedo to early walking-stick embryos Wt 8 wk ATGE_81 not applicable not applicable not applicable 12.3464
seeds seeds, stage 8, w/o siliques; walking-stick to early curled cotyledons embryos Wt 8 wk ATGE_82 not applicable not applicable not applicable 14.9757
seeds seeds, stage 9, w/o siliques; curled cotyledons to early green cotyledons embryos Wt 8 wk ATGE_83 not applicable not applicable not applicable 13.5434
seeds seeds, stage 10, w/o siliques; green cotyledons embryos Wt 8 wk ATGE_84 not applicable not applicable not applicable 18.7257


get table as tab-delimited text file


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