AtGenExpress Visualization Tool (AVT)


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enter desired AGI or Affymetrix identifiers (comma
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254595_at; then press "Run"

AtGenExpress
coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord

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Schmid, M., Davison, T.S., Henz, S.R., Pape, U.J., Demar, M., Vingron, M.,
Schölkopf, B., Weigel, D. and Lohmann, J.U. (2005). A gene expression
map of Arabidopsis thaliana development. Nat. Genet. 37, 501-6.

back to AtGenExpress main page Explanation to samples and expression values

developer: Christian K. Widmer

get table as tab-delimited text file


tissue cluster tissue genotype age sample Id stress time treatment expression value for 250666_at (at5g07100)
root roots Wt 7 days ATGE_3 not applicable not applicable not applicable 77.6405
root roots Wt 17 days ATGE_9 not applicable not applicable not applicable 67.3444
root root Wt 15 days ATGE_93 not applicable not applicable not applicable 98.0121
root root Wt 8 days ATGE_94 not applicable not applicable not applicable 147.4328
root root Wt 8 days ATGE_95 not applicable not applicable not applicable 96.3764
root root Wt 21 days ATGE_98 not applicable not applicable not applicable 265.6932
root root Wt 21 days ATGE_99 not applicable not applicable not applicable 197.2685
stem hypocotyl Wt 7 days ATGE_2 not applicable not applicable not applicable 41.5038
stem 1st node Wt 21+ days ATGE_28 not applicable not applicable not applicable 8.1325
stem stem, 2nd internode Wt 21+ days ATGE_27 not applicable not applicable not applicable 18.3983
leaf cotyledons Wt 7 days ATGE_1 not applicable not applicable not applicable 117.8746
leaf leaves 1 + 2 Wt 7 days ATGE_5 not applicable not applicable not applicable 14.2065
leaf rosette leaf #4, 1 cm long Wt 10 days ATGE_10 not applicable not applicable not applicable 11.0137
leaf rosette leaf #4, 1 cm long gl1-T 10 days ATGE_11 not applicable not applicable not applicable 17.2508
leaf rosette leaf # 2 Wt 17 days ATGE_12 not applicable not applicable not applicable 436.9484
leaf rosette leaf # 4 Wt 17 days ATGE_13 not applicable not applicable not applicable 116.0828
leaf rosette leaf # 6 Wt 17 days ATGE_14 not applicable not applicable not applicable 28.2765
leaf rosette leaf # 8 Wt 17 days ATGE_15 not applicable not applicable not applicable 18.1489
leaf rosette leaf # 10 Wt 17 days ATGE_16 not applicable not applicable not applicable 19.1761
leaf rosette leaf # 12 Wt 17 days ATGE_17 not applicable not applicable not applicable 11.8178
leaf rosette leaf # 12 gl1-T 17 days ATGE_18 not applicable not applicable not applicable 11.7096
leaf leaf 7, petiole Wt 17 days ATGE_19 not applicable not applicable not applicable 17.1519
leaf leaf 7, proximal half Wt 17 days ATGE_20 not applicable not applicable not applicable 24.2728
leaf leaf 7, distal half Wt 17 days ATGE_21 not applicable not applicable not applicable 42.2831
leaf leaf Wt 15 days ATGE_91 not applicable not applicable not applicable 36.8625
leaf senescing leaves Wt 35 days ATGE_25 not applicable not applicable not applicable 730.4532
leaf cauline leaves Wt 21+ days ATGE_26 not applicable not applicable not applicable 254.6012
whole plant seedling, green parts Wt 7 days ATGE_7 not applicable not applicable not applicable 10.3365
whole plant seedling, green parts Wt 8 days ATGE_96 not applicable not applicable not applicable 364.0051
whole plant seedling, green parts Wt 8 days ATGE_97 not applicable not applicable not applicable 140.5837
whole plant seedling, green parts Wt 21 days ATGE_100 not applicable not applicable not applicable 469.6886
whole plant seedling, green parts Wt 21 days ATGE_101 not applicable not applicable not applicable 316.8021
whole plant developmental drift, entire rosette after transition to flowering, but before bolting Wt 21 days ATGE_22 not applicable not applicable not applicable 49.4656
whole plant as above Wt 22 days ATGE_23 not applicable not applicable not applicable 24.2876
whole plant as above Wt 23 days ATGE_24 not applicable not applicable not applicable 54.2314
whole plant vegetative rosette Wt 7 days ATGE_87 not applicable not applicable not applicable 12.0762
whole plant vegetative rosette Wt 14 days ATGE_89 not applicable not applicable not applicable 11.2027
whole plant vegetative rosette Wt 21 days ATGE_90 not applicable not applicable not applicable 16.4341
apex shoot apex, vegetative + young leaves Wt 7 days ATGE_4 not applicable not applicable not applicable 10.0394
apex shoot apex, vegetative Wt 7 days ATGE_6 not applicable not applicable not applicable 9.9767
apex shoot apex, transition (before bolting) Wt 14 days ATGE_8 not applicable not applicable not applicable 8.7211
apex shoot apex, inflorescence (after bolting) Wt 21 days ATGE_29 not applicable not applicable not applicable 8.5650
apex shoot apex, inflorescence (after bolting) clv3-7 21+ days ATGE_46 not applicable not applicable not applicable 7.7156
apex shoot apex, inflorescence (after bolting) lfy-12 21+ days ATGE_47 not applicable not applicable not applicable 8.6810
apex shoot apex, inflorescence (after bolting) ap1-15 21+ days ATGE_48 not applicable not applicable not applicable 10.3085
apex shoot apex, inflorescence (after bolting) ap2-6 21+ days ATGE_49 not applicable not applicable not applicable 9.2863
apex shoot apex, inflorescence (after bolting) ufo-1 21+ days ATGE_52 not applicable not applicable not applicable 9.8842
apex shoot apex, inflorescence (after bolting) ap3-6 21+ days ATGE_50 not applicable not applicable not applicable 9.0817
apex shoot apex, inflorescence (after bolting) ag-12 21+ days ATGE_51 not applicable not applicable not applicable 10.3702
flowers flowers stage 9 Wt 21+ days ATGE_31 not applicable not applicable not applicable 7.2048
flowers flowers stage 10/11 Wt 21+ days ATGE_32 not applicable not applicable not applicable 7.1026
flowers flowers stage 12 Wt 21+ days ATGE_33 not applicable not applicable not applicable 8.0098
flowers flower stage 12; multi-carpel gynoeceum; enlarged meristem; increased organ number clv3-7 21+ days ATGE_53 not applicable not applicable not applicable 7.8614
flowers flower stage 12; shoot characteristics; most organs leaf-like lfy-12 21+ days ATGE_54 not applicable not applicable not applicable 9.7094
flowers flower stage 12; sepals replaced by leaf-like organs, petals mostly lacking, has secondary flowers ap1-15 21+ days ATGE_55 not applicable not applicable not applicable 8.8192
flowers flower stage 12; no sepals or petals ap2-6 21+ days ATGE_56 not applicable not applicable not applicable 8.6268
flowers flower stage 12; filamentous organs in whorls two and three ufo-1 21+ days ATGE_59 not applicable not applicable not applicable 8.4660
flowers flower stage 12; no petals or stamens ap3-6 21+ days ATGE_57 not applicable not applicable not applicable 8.2202
flowers flower stage 12; no stamens or carpels ag-12 21+ days ATGE_58 not applicable not applicable not applicable 10.0003
flowers flowers stage 15 Wt 21+ days ATGE_39 not applicable not applicable not applicable 28.0782
flowers flower Wt 28 days ATGE_92 not applicable not applicable not applicable 7.4489
floral organs flowers stage 15, pedicels Wt 21+ days ATGE_40 not applicable not applicable not applicable 12.0181
floral organs flowers stage 12, sepals Wt 21+ days ATGE_34 not applicable not applicable not applicable 13.2962
floral organs flowers stage 15, sepals Wt 21+ days ATGE_41 not applicable not applicable not applicable 126.5679
floral organs flowers stage 12, petals Wt 21+ days ATGE_35 not applicable not applicable not applicable 10.0181
floral organs flowers stage 15, petals Wt 21+ days ATGE_42 not applicable not applicable not applicable 111.9763
floral organs flowers stage 12, stamens Wt 21+ days ATGE_36 not applicable not applicable not applicable 10.8209
floral organs flowers stage 15, stamen Wt 21+ days ATGE_43 not applicable not applicable not applicable 21.6474
floral organs mature pollen Wt 6 wk ATGE_73 not applicable not applicable not applicable 36.4101
floral organs flowers stage 12, carpels Wt 21+ days ATGE_37 not applicable not applicable not applicable 8.1609
floral organs flowers stage 15, carpels Wt 21+ days ATGE_45 not applicable not applicable not applicable 9.3582
seeds siliques, w/ seeds stage 3; mid globular to early heart embryos Wt 8 wk ATGE_76 not applicable not applicable not applicable 10.0677
seeds siliques, w/ seeds stage 4; early to late heart embryos Wt 8 wk ATGE_77 not applicable not applicable not applicable 9.6834
seeds siliques, w/ seeds stage 5; late heart to mid torpedo embryos Wt 8 wk ATGE_78 not applicable not applicable not applicable 15.2448
seeds seeds, stage 6, w/o siliques; mid to late torpedo embryos Wt 8 wk ATGE_79 not applicable not applicable not applicable 10.8679
seeds seeds, stage 7, w/o siliques; late torpedo to early walking-stick embryos Wt 8 wk ATGE_81 not applicable not applicable not applicable 16.3398
seeds seeds, stage 8, w/o siliques; walking-stick to early curled cotyledons embryos Wt 8 wk ATGE_82 not applicable not applicable not applicable 19.9896
seeds seeds, stage 9, w/o siliques; curled cotyledons to early green cotyledons embryos Wt 8 wk ATGE_83 not applicable not applicable not applicable 28.5926
seeds seeds, stage 10, w/o siliques; green cotyledons embryos Wt 8 wk ATGE_84 not applicable not applicable not applicable 21.6799


get table as tab-delimited text file


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