AtGenExpress Visualization Tool (AVT)


Select experiment
Select normalization        only create tab-delimited file
Select genes
enter desired AGI or Affymetrix identifiers (comma
separated), e.g.:At5G61850, At5G57090, At1G29910,
254595_at; then press "Run"

AtGenExpress
coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord coord

Mouse over for sample and expression information.
plot
Schmid, M., Davison, T.S., Henz, S.R., Pape, U.J., Demar, M., Vingron, M.,
Schölkopf, B., Weigel, D. and Lohmann, J.U. (2005). A gene expression
map of Arabidopsis thaliana development. Nat. Genet. 37, 501-6.

back to AtGenExpress main page Explanation to samples and expression values

developer: Christian K. Widmer

get table as tab-delimited text file


tissue cluster tissue genotype age sample Id stress time treatment expression value for 246531_at (at5g15800)
root roots Wt 7 days ATGE_3 not applicable not applicable not applicable 6.8298
root roots Wt 17 days ATGE_9 not applicable not applicable not applicable 7.7078
root root Wt 15 days ATGE_93 not applicable not applicable not applicable 8.0995
root root Wt 8 days ATGE_94 not applicable not applicable not applicable 4.9361
root root Wt 8 days ATGE_95 not applicable not applicable not applicable 7.8666
root root Wt 21 days ATGE_98 not applicable not applicable not applicable 8.6772
root root Wt 21 days ATGE_99 not applicable not applicable not applicable 7.0826
stem hypocotyl Wt 7 days ATGE_2 not applicable not applicable not applicable 5.7539
stem 1st node Wt 21+ days ATGE_28 not applicable not applicable not applicable 5.9743
stem stem, 2nd internode Wt 21+ days ATGE_27 not applicable not applicable not applicable 6.1796
leaf cotyledons Wt 7 days ATGE_1 not applicable not applicable not applicable 9.8690
leaf leaves 1 + 2 Wt 7 days ATGE_5 not applicable not applicable not applicable 19.7773
leaf rosette leaf #4, 1 cm long Wt 10 days ATGE_10 not applicable not applicable not applicable 12.0869
leaf rosette leaf #4, 1 cm long gl1-T 10 days ATGE_11 not applicable not applicable not applicable 14.7282
leaf rosette leaf # 2 Wt 17 days ATGE_12 not applicable not applicable not applicable 15.1764
leaf rosette leaf # 4 Wt 17 days ATGE_13 not applicable not applicable not applicable 8.0937
leaf rosette leaf # 6 Wt 17 days ATGE_14 not applicable not applicable not applicable 9.9512
leaf rosette leaf # 8 Wt 17 days ATGE_15 not applicable not applicable not applicable 10.0772
leaf rosette leaf # 10 Wt 17 days ATGE_16 not applicable not applicable not applicable 22.1424
leaf rosette leaf # 12 Wt 17 days ATGE_17 not applicable not applicable not applicable 43.5705
leaf rosette leaf # 12 gl1-T 17 days ATGE_18 not applicable not applicable not applicable 25.0684
leaf leaf 7, petiole Wt 17 days ATGE_19 not applicable not applicable not applicable 9.0180
leaf leaf 7, proximal half Wt 17 days ATGE_20 not applicable not applicable not applicable 9.8222
leaf leaf 7, distal half Wt 17 days ATGE_21 not applicable not applicable not applicable 12.3388
leaf leaf Wt 15 days ATGE_91 not applicable not applicable not applicable 8.4395
leaf senescing leaves Wt 35 days ATGE_25 not applicable not applicable not applicable 8.6323
leaf cauline leaves Wt 21+ days ATGE_26 not applicable not applicable not applicable 330.7833
whole plant seedling, green parts Wt 7 days ATGE_7 not applicable not applicable not applicable 7.6367
whole plant seedling, green parts Wt 8 days ATGE_96 not applicable not applicable not applicable 6.6908
whole plant seedling, green parts Wt 8 days ATGE_97 not applicable not applicable not applicable 6.6631
whole plant seedling, green parts Wt 21 days ATGE_100 not applicable not applicable not applicable 43.5519
whole plant seedling, green parts Wt 21 days ATGE_101 not applicable not applicable not applicable 77.1075
whole plant developmental drift, entire rosette after transition to flowering, but before bolting Wt 21 days ATGE_22 not applicable not applicable not applicable 19.6951
whole plant as above Wt 22 days ATGE_23 not applicable not applicable not applicable 18.3679
whole plant as above Wt 23 days ATGE_24 not applicable not applicable not applicable 26.9611
whole plant vegetative rosette Wt 7 days ATGE_87 not applicable not applicable not applicable 9.3561
whole plant vegetative rosette Wt 14 days ATGE_89 not applicable not applicable not applicable 5.7106
whole plant vegetative rosette Wt 21 days ATGE_90 not applicable not applicable not applicable 10.0269
apex shoot apex, vegetative + young leaves Wt 7 days ATGE_4 not applicable not applicable not applicable 8.2850
apex shoot apex, vegetative Wt 7 days ATGE_6 not applicable not applicable not applicable 8.8303
apex shoot apex, transition (before bolting) Wt 14 days ATGE_8 not applicable not applicable not applicable 237.3836
apex shoot apex, inflorescence (after bolting) Wt 21 days ATGE_29 not applicable not applicable not applicable 602.5520
apex shoot apex, inflorescence (after bolting) clv3-7 21+ days ATGE_46 not applicable not applicable not applicable 462.0988
apex shoot apex, inflorescence (after bolting) lfy-12 21+ days ATGE_47 not applicable not applicable not applicable 8.4418
apex shoot apex, inflorescence (after bolting) ap1-15 21+ days ATGE_48 not applicable not applicable not applicable 812.1806
apex shoot apex, inflorescence (after bolting) ap2-6 21+ days ATGE_49 not applicable not applicable not applicable 533.0812
apex shoot apex, inflorescence (after bolting) ufo-1 21+ days ATGE_52 not applicable not applicable not applicable 421.9040
apex shoot apex, inflorescence (after bolting) ap3-6 21+ days ATGE_50 not applicable not applicable not applicable 325.4807
apex shoot apex, inflorescence (after bolting) ag-12 21+ days ATGE_51 not applicable not applicable not applicable 645.3950
flowers flowers stage 9 Wt 21+ days ATGE_31 not applicable not applicable not applicable 843.8170
flowers flowers stage 10/11 Wt 21+ days ATGE_32 not applicable not applicable not applicable 766.6341
flowers flowers stage 12 Wt 21+ days ATGE_33 not applicable not applicable not applicable 665.3737
flowers flower stage 12; multi-carpel gynoeceum; enlarged meristem; increased organ number clv3-7 21+ days ATGE_53 not applicable not applicable not applicable 655.1347
flowers flower stage 12; shoot characteristics; most organs leaf-like lfy-12 21+ days ATGE_54 not applicable not applicable not applicable 8.3938
flowers flower stage 12; sepals replaced by leaf-like organs, petals mostly lacking, has secondary flowers ap1-15 21+ days ATGE_55 not applicable not applicable not applicable 831.2328
flowers flower stage 12; no sepals or petals ap2-6 21+ days ATGE_56 not applicable not applicable not applicable 802.5174
flowers flower stage 12; filamentous organs in whorls two and three ufo-1 21+ days ATGE_59 not applicable not applicable not applicable 741.4737
flowers flower stage 12; no petals or stamens ap3-6 21+ days ATGE_57 not applicable not applicable not applicable 941.3916
flowers flower stage 12; no stamens or carpels ag-12 21+ days ATGE_58 not applicable not applicable not applicable 635.9646
flowers flowers stage 15 Wt 21+ days ATGE_39 not applicable not applicable not applicable 1114.1655
flowers flower Wt 28 days ATGE_92 not applicable not applicable not applicable 550.3896
floral organs flowers stage 15, pedicels Wt 21+ days ATGE_40 not applicable not applicable not applicable 281.8399
floral organs flowers stage 12, sepals Wt 21+ days ATGE_34 not applicable not applicable not applicable 566.7508
floral organs flowers stage 15, sepals Wt 21+ days ATGE_41 not applicable not applicable not applicable 1190.4131
floral organs flowers stage 12, petals Wt 21+ days ATGE_35 not applicable not applicable not applicable 190.9738
floral organs flowers stage 15, petals Wt 21+ days ATGE_42 not applicable not applicable not applicable 760.4448
floral organs flowers stage 12, stamens Wt 21+ days ATGE_36 not applicable not applicable not applicable 770.7481
floral organs flowers stage 15, stamen Wt 21+ days ATGE_43 not applicable not applicable not applicable 1129.6189
floral organs mature pollen Wt 6 wk ATGE_73 not applicable not applicable not applicable 164.9420
floral organs flowers stage 12, carpels Wt 21+ days ATGE_37 not applicable not applicable not applicable 1082.9120
floral organs flowers stage 15, carpels Wt 21+ days ATGE_45 not applicable not applicable not applicable 1177.6019
seeds siliques, w/ seeds stage 3; mid globular to early heart embryos Wt 8 wk ATGE_76 not applicable not applicable not applicable 971.0909
seeds siliques, w/ seeds stage 4; early to late heart embryos Wt 8 wk ATGE_77 not applicable not applicable not applicable 1332.1745
seeds siliques, w/ seeds stage 5; late heart to mid torpedo embryos Wt 8 wk ATGE_78 not applicable not applicable not applicable 1029.1369
seeds seeds, stage 6, w/o siliques; mid to late torpedo embryos Wt 8 wk ATGE_79 not applicable not applicable not applicable 393.0377
seeds seeds, stage 7, w/o siliques; late torpedo to early walking-stick embryos Wt 8 wk ATGE_81 not applicable not applicable not applicable 549.5359
seeds seeds, stage 8, w/o siliques; walking-stick to early curled cotyledons embryos Wt 8 wk ATGE_82 not applicable not applicable not applicable 245.1584
seeds seeds, stage 9, w/o siliques; curled cotyledons to early green cotyledons embryos Wt 8 wk ATGE_83 not applicable not applicable not applicable 256.5804
seeds seeds, stage 10, w/o siliques; green cotyledons embryos Wt 8 wk ATGE_84 not applicable not applicable not applicable 211.2912


get table as tab-delimited text file


weigelworld.org | Datenschutzerklärung | Impressum