AtGenExpress Visualization Tool (AVT)


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254595_at; then press "Run"

AtGenExpress
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Schmid, M., Davison, T.S., Henz, S.R., Pape, U.J., Demar, M., Vingron, M.,
Schölkopf, B., Weigel, D. and Lohmann, J.U. (2005). A gene expression
map of Arabidopsis thaliana development. Nat. Genet. 37, 501-6.

back to AtGenExpress main page Explanation to samples and expression values

developer: Christian K. Widmer

get table as tab-delimited text file


tissue cluster tissue genotype age sample Id stress time treatment expression value for 247270_at (at5g64220)
root roots Wt 7 days ATGE_3 not applicable not applicable not applicable 210.1770
root roots Wt 17 days ATGE_9 not applicable not applicable not applicable 202.0506
root root Wt 15 days ATGE_93 not applicable not applicable not applicable 236.0422
root root Wt 8 days ATGE_94 not applicable not applicable not applicable 296.5998
root root Wt 8 days ATGE_95 not applicable not applicable not applicable 239.5623
root root Wt 21 days ATGE_98 not applicable not applicable not applicable 316.6067
root root Wt 21 days ATGE_99 not applicable not applicable not applicable 312.5865
stem hypocotyl Wt 7 days ATGE_2 not applicable not applicable not applicable 138.2920
stem 1st node Wt 21+ days ATGE_28 not applicable not applicable not applicable 194.8886
stem stem, 2nd internode Wt 21+ days ATGE_27 not applicable not applicable not applicable 222.7891
leaf cotyledons Wt 7 days ATGE_1 not applicable not applicable not applicable 149.9906
leaf leaves 1 + 2 Wt 7 days ATGE_5 not applicable not applicable not applicable 143.5958
leaf rosette leaf #4, 1 cm long Wt 10 days ATGE_10 not applicable not applicable not applicable 117.4017
leaf rosette leaf #4, 1 cm long gl1-T 10 days ATGE_11 not applicable not applicable not applicable 131.0885
leaf rosette leaf # 2 Wt 17 days ATGE_12 not applicable not applicable not applicable 158.2142
leaf rosette leaf # 4 Wt 17 days ATGE_13 not applicable not applicable not applicable 163.0048
leaf rosette leaf # 6 Wt 17 days ATGE_14 not applicable not applicable not applicable 170.2264
leaf rosette leaf # 8 Wt 17 days ATGE_15 not applicable not applicable not applicable 178.0176
leaf rosette leaf # 10 Wt 17 days ATGE_16 not applicable not applicable not applicable 162.6858
leaf rosette leaf # 12 Wt 17 days ATGE_17 not applicable not applicable not applicable 149.9282
leaf rosette leaf # 12 gl1-T 17 days ATGE_18 not applicable not applicable not applicable 150.4309
leaf leaf 7, petiole Wt 17 days ATGE_19 not applicable not applicable not applicable 183.6009
leaf leaf 7, proximal half Wt 17 days ATGE_20 not applicable not applicable not applicable 201.3359
leaf leaf 7, distal half Wt 17 days ATGE_21 not applicable not applicable not applicable 187.7697
leaf leaf Wt 15 days ATGE_91 not applicable not applicable not applicable 144.2502
leaf senescing leaves Wt 35 days ATGE_25 not applicable not applicable not applicable 328.0298
leaf cauline leaves Wt 21+ days ATGE_26 not applicable not applicable not applicable 245.2120
whole plant seedling, green parts Wt 7 days ATGE_7 not applicable not applicable not applicable 184.9415
whole plant seedling, green parts Wt 8 days ATGE_96 not applicable not applicable not applicable 233.2786
whole plant seedling, green parts Wt 8 days ATGE_97 not applicable not applicable not applicable 158.9510
whole plant seedling, green parts Wt 21 days ATGE_100 not applicable not applicable not applicable 239.4300
whole plant seedling, green parts Wt 21 days ATGE_101 not applicable not applicable not applicable 199.9330
whole plant developmental drift, entire rosette after transition to flowering, but before bolting Wt 21 days ATGE_22 not applicable not applicable not applicable 188.0296
whole plant as above Wt 22 days ATGE_23 not applicable not applicable not applicable 164.2392
whole plant as above Wt 23 days ATGE_24 not applicable not applicable not applicable 171.6089
whole plant vegetative rosette Wt 7 days ATGE_87 not applicable not applicable not applicable 135.1158
whole plant vegetative rosette Wt 14 days ATGE_89 not applicable not applicable not applicable 146.2507
whole plant vegetative rosette Wt 21 days ATGE_90 not applicable not applicable not applicable 121.1740
apex shoot apex, vegetative + young leaves Wt 7 days ATGE_4 not applicable not applicable not applicable 151.9123
apex shoot apex, vegetative Wt 7 days ATGE_6 not applicable not applicable not applicable 138.9480
apex shoot apex, transition (before bolting) Wt 14 days ATGE_8 not applicable not applicable not applicable 166.5083
apex shoot apex, inflorescence (after bolting) Wt 21 days ATGE_29 not applicable not applicable not applicable 166.7846
apex shoot apex, inflorescence (after bolting) clv3-7 21+ days ATGE_46 not applicable not applicable not applicable 200.1775
apex shoot apex, inflorescence (after bolting) lfy-12 21+ days ATGE_47 not applicable not applicable not applicable 201.3106
apex shoot apex, inflorescence (after bolting) ap1-15 21+ days ATGE_48 not applicable not applicable not applicable 231.5577
apex shoot apex, inflorescence (after bolting) ap2-6 21+ days ATGE_49 not applicable not applicable not applicable 213.1657
apex shoot apex, inflorescence (after bolting) ufo-1 21+ days ATGE_52 not applicable not applicable not applicable 191.7854
apex shoot apex, inflorescence (after bolting) ap3-6 21+ days ATGE_50 not applicable not applicable not applicable 218.2131
apex shoot apex, inflorescence (after bolting) ag-12 21+ days ATGE_51 not applicable not applicable not applicable 208.9947
flowers flowers stage 9 Wt 21+ days ATGE_31 not applicable not applicable not applicable 156.3102
flowers flowers stage 10/11 Wt 21+ days ATGE_32 not applicable not applicable not applicable 172.4452
flowers flowers stage 12 Wt 21+ days ATGE_33 not applicable not applicable not applicable 171.2234
flowers flower stage 12; multi-carpel gynoeceum; enlarged meristem; increased organ number clv3-7 21+ days ATGE_53 not applicable not applicable not applicable 156.7746
flowers flower stage 12; shoot characteristics; most organs leaf-like lfy-12 21+ days ATGE_54 not applicable not applicable not applicable 196.8822
flowers flower stage 12; sepals replaced by leaf-like organs, petals mostly lacking, has secondary flowers ap1-15 21+ days ATGE_55 not applicable not applicable not applicable 190.1141
flowers flower stage 12; no sepals or petals ap2-6 21+ days ATGE_56 not applicable not applicable not applicable 171.6575
flowers flower stage 12; filamentous organs in whorls two and three ufo-1 21+ days ATGE_59 not applicable not applicable not applicable 176.8720
flowers flower stage 12; no petals or stamens ap3-6 21+ days ATGE_57 not applicable not applicable not applicable 189.5045
flowers flower stage 12; no stamens or carpels ag-12 21+ days ATGE_58 not applicable not applicable not applicable 188.4045
flowers flowers stage 15 Wt 21+ days ATGE_39 not applicable not applicable not applicable 147.8154
flowers flower Wt 28 days ATGE_92 not applicable not applicable not applicable 134.8086
floral organs flowers stage 15, pedicels Wt 21+ days ATGE_40 not applicable not applicable not applicable 146.6424
floral organs flowers stage 12, sepals Wt 21+ days ATGE_34 not applicable not applicable not applicable 168.7406
floral organs flowers stage 15, sepals Wt 21+ days ATGE_41 not applicable not applicable not applicable 233.1946
floral organs flowers stage 12, petals Wt 21+ days ATGE_35 not applicable not applicable not applicable 264.8586
floral organs flowers stage 15, petals Wt 21+ days ATGE_42 not applicable not applicable not applicable 315.9814
floral organs flowers stage 12, stamens Wt 21+ days ATGE_36 not applicable not applicable not applicable 179.5499
floral organs flowers stage 15, stamen Wt 21+ days ATGE_43 not applicable not applicable not applicable 248.6936
floral organs mature pollen Wt 6 wk ATGE_73 not applicable not applicable not applicable 60.8507
floral organs flowers stage 12, carpels Wt 21+ days ATGE_37 not applicable not applicable not applicable 209.4825
floral organs flowers stage 15, carpels Wt 21+ days ATGE_45 not applicable not applicable not applicable 149.4933
seeds siliques, w/ seeds stage 3; mid globular to early heart embryos Wt 8 wk ATGE_76 not applicable not applicable not applicable 81.3290
seeds siliques, w/ seeds stage 4; early to late heart embryos Wt 8 wk ATGE_77 not applicable not applicable not applicable 107.2314
seeds siliques, w/ seeds stage 5; late heart to mid torpedo embryos Wt 8 wk ATGE_78 not applicable not applicable not applicable 104.9289
seeds seeds, stage 6, w/o siliques; mid to late torpedo embryos Wt 8 wk ATGE_79 not applicable not applicable not applicable 100.3250
seeds seeds, stage 7, w/o siliques; late torpedo to early walking-stick embryos Wt 8 wk ATGE_81 not applicable not applicable not applicable 83.0404
seeds seeds, stage 8, w/o siliques; walking-stick to early curled cotyledons embryos Wt 8 wk ATGE_82 not applicable not applicable not applicable 128.2733
seeds seeds, stage 9, w/o siliques; curled cotyledons to early green cotyledons embryos Wt 8 wk ATGE_83 not applicable not applicable not applicable 124.5675
seeds seeds, stage 10, w/o siliques; green cotyledons embryos Wt 8 wk ATGE_84 not applicable not applicable not applicable 125.0024


get table as tab-delimited text file